RNA–Protein interactions for RNA: ENST00000419314.5

CCT6P3-201, Transcript of chaperonin containing TCP1 subunit 6 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CCT6P3, Length 3,702 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6P3-201ENST00000419314 CEP290O15078 2479 aa13.96□□□□□ -0.17
CCT6P3-201ENST00000419314 AIM2O14862 343 aa13.96□□□□□ -0.17
CCT6P3-201ENST00000419314 GIPC1O14908 333 aa13.96□□□□□ -0.17
CCT6P3-201ENST00000419314 ENTPD5O75356 428 aa13.96□□□□□ -0.17
CCT6P3-201ENST00000419314 RHOBTB1O94844 696 aa13.96□□□□□ -0.17
CCT6P3-201ENST00000419314 PROCP04070 461 aa13.96□□□□□ -0.17
CCT6P3-201ENST00000419314 GLDCP23378 1020 aa13.96□□□□□ -0.17
CCT6P3-201ENST00000419314 CCR10P46092 362 aa13.96□□□□□ -0.17
CCT6P3-201ENST00000419314 C1orf146Q5VVC0 180 aa13.96□□□□□ -0.17
CCT6P3-201ENST00000419314 ICE2Q659A1 982 aa13.96□□□□□ -0.17
CCT6P3-201ENST00000419314 GATA5Q9BWX5 397 aaPredicted RBP13.96□□□□□ -0.17
CCT6P3-201ENST00000419314 GPR63Q9BZJ6 419 aa13.96□□□□□ -0.17
CCT6P3-201ENST00000419314 ELAC1Q9H777 363 aaKnown RBP13.96□□□□□ -0.17
CCT6P3-201ENST00000419314 NCF1BA6NI72 391 aaPredicted RBP13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 NCF1CA8MVU1 366 aaPredicted RBP13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 TMEM189-UBE2V1I3L0A0 370 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 AURKAO14965 403 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 DLDP09622 509 aaKnown RBP13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 NCF1P14598 390 aaPredicted RBP13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 HNRNPLP14866 589 aaKnown RBP eCLIP13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 CALB2P22676 271 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 MPSTP25325 297 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 HTR7P34969 479 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 RBM20Q5T481 1227 aaKnown RBP13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 SNX30Q5VWJ9 437 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 DNAJB7Q7Z6W7 309 aaPredicted RBP13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 OR13C4Q8NGS5 318 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 ZNF398Q8TD17 642 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 C7orf26Q96N11 449 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 TTC1Q99614 292 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 DDX50Q9BQ39 737 aaKnown RBP13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 ALG9Q9H6U8 611 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 WDR55Q9H6Y2 383 aaPredicted RBP13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 LSM7Q9UK45 103 aaKnown RBP13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 BRCA2P51587 3418 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 COCHO43405 550 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 CHRNGP07510 517 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 DHRS4L1P0CG22 281 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 GABRR2P28476 465 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 ATXN3P54252 364 aaPredicted RBP13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 PARP15Q460N3 678 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 AGAP9Q5VTM2 703 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 GLT6D1Q7Z4J2 308 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 FSTL5Q8N475 847 aaPredicted RBP13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 BCL7CQ8WUZ0 217 aaPredicted RBP13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 SKA2Q8WVK7 121 aaPredicted RBP13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 TSPAN17Q96FV3 270 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 MARK4Q96L34 752 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 CDK5RAP1Q96SZ6 601 aaKnown RBP13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 BTBD10Q9BSF8 475 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 KIFC1Q9BW19 673 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 VPS45Q9NRW7 570 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 NOP53Q9NZM5 478 aaKnown RBP13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 SIRPGQ9P1W8 387 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 YIPF1Q9Y548 306 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 GOLGA4Q13439 2230 aaKnown RBP13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 C2orf78A6NCI8 922 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 SNAP91O60641 907 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 CSF2RAP15509 400 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 YBEYP58557 167 aaPredicted RBP13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 SMARCB1Q12824 385 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 TIFABQ6ZNK6 161 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 EFCAB3Q8N7B9 438 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 ZNF781Q8N8C0 355 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 DIS3LQ8TF46 1054 aaKnown RBP13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 C1orf74Q96LT6 269 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 C20orf27Q9GZN8 174 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 FAM96AQ9H5X1 160 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 TMEM248Q9NWD8 314 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 SPG21Q9NZD8 308 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 SSX2IPQ9Y2D8 614 aa13.95□□□□□ -0.18
CCT6P3-201ENST00000419314 E5RI56 91 aa13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 PITPNM1O00562 1244 aa13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 IGHA2P01877 340 aa13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 ATF6P18850 670 aa13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 CHRM3P20309 590 aa13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 EPHA3P29320 983 aa13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 FMO4P31512 558 aa13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 CCNFP41002 786 aa13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 PCLAFQ15004 111 aa13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 MMEL1Q495T6 779 aa13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 SIRPB2Q5JXA9 342 aa13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 TSTD2Q5T7W7 516 aa13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 KCTD11Q693B1 232 aa13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 BNIPLQ7Z465 357 aa13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 UMODL1-AS1Q8N2C9 162 aa13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 ELMOD1Q8N336 334 aa13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 PDZD8Q8NEN9 1154 aa13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 ZNF461Q8TAF7 563 aa13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 PAWRQ96IZ0 340 aaKnown RBP13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 POMKQ9H5K3 350 aa13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 PACSIN3Q9UKS6 424 aa13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 SRP72O76094 671 aaKnown RBP13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 WEE1P30291 646 aa13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 CDK7P50613 346 aa13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 IL10RBQ08334 325 aa13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 RPS6KA2Q15349 733 aa13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 FBXO48Q5FWF7 155 aa13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 FSCBQ5H9T9 825 aa13.94□□□□□ -0.18
CCT6P3-201ENST00000419314 SEL1L3Q68CR1 1132 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms