RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 PDK2Q15119 407 aa20.55■□□□□ 0.88
GTF3A-202ENST00000419181 TCEAL1Q15170 157 aa20.55■□□□□ 0.88
GTF3A-202ENST00000419181 TTC7BQ86TV6 843 aa20.55■□□□□ 0.88
GTF3A-202ENST00000419181 SPATS2Q86XZ4 545 aaKnown RBP20.55■□□□□ 0.88
GTF3A-202ENST00000419181 HCAR2Q8TDS4 363 aa20.55■□□□□ 0.88
GTF3A-202ENST00000419181 PSKH2Q96QS6 385 aa20.55■□□□□ 0.88
GTF3A-202ENST00000419181 MYOCQ99972 504 aa20.55■□□□□ 0.88
GTF3A-202ENST00000419181 ZNF670Q9BS34 389 aa20.55■□□□□ 0.88
GTF3A-202ENST00000419181 C1QTNF2Q9BXJ5 285 aa20.55■□□□□ 0.88
GTF3A-202ENST00000419181 SLC17A9Q9BYT1 436 aa20.55■□□□□ 0.88
GTF3A-202ENST00000419181 ERVMER34-1Q9H9K5 563 aa20.55■□□□□ 0.88
GTF3A-202ENST00000419181 FZD3Q9NPG1 666 aa20.55■□□□□ 0.88
GTF3A-202ENST00000419181 KLHL11Q9NVR0 708 aa20.55■□□□□ 0.88
GTF3A-202ENST00000419181 SHROOM3Q8TF72 1996 aa20.55■□□□□ 0.88
GTF3A-202ENST00000419181 TMEM110-MUSTN1A8MSY1 372 aa20.54■□□□□ 0.88
GTF3A-202ENST00000419181 MUSKO15146 869 aa20.54■□□□□ 0.88
GTF3A-202ENST00000419181 BUB1BO60566 1050 aaPredicted RBP20.54■□□□□ 0.88
GTF3A-202ENST00000419181 MAGEC1O60732 1142 aa20.54■□□□□ 0.88
GTF3A-202ENST00000419181 TIMP2P16035 220 aa20.54■□□□□ 0.88
GTF3A-202ENST00000419181 NSUN2Q08J23 767 aaKnown RBP eCLIP20.54■□□□□ 0.88
GTF3A-202ENST00000419181 SLC10A7Q0GE19 358 aa20.54■□□□□ 0.88
GTF3A-202ENST00000419181 LBRQ14739 615 aaKnown RBP20.54■□□□□ 0.88
GTF3A-202ENST00000419181 SUZ12Q15022 739 aaKnown RBP20.54■□□□□ 0.88
GTF3A-202ENST00000419181 SHBQ15464 509 aa20.54■□□□□ 0.88
GTF3A-202ENST00000419181 LRRC73Q5JTD7 316 aa20.54■□□□□ 0.88
GTF3A-202ENST00000419181 PRAMEF14Q5SWL7 426 aa20.54■□□□□ 0.88
GTF3A-202ENST00000419181 SRLQ86TD4 932 aa20.54■□□□□ 0.88
GTF3A-202ENST00000419181 ATPAF2Q8N5M1 289 aa20.54■□□□□ 0.88
GTF3A-202ENST00000419181 KCTD6Q8NC69 237 aa20.54■□□□□ 0.88
GTF3A-202ENST00000419181 PCDH19Q8TAB3 1148 aa20.54■□□□□ 0.88
GTF3A-202ENST00000419181 BAHD1Q8TBE0 780 aaPredicted RBP20.54■□□□□ 0.88
GTF3A-202ENST00000419181 SETD7Q8WTS6 366 aaKnown RBP20.54■□□□□ 0.88
GTF3A-202ENST00000419181 FAF2Q96CS3 445 aa20.54■□□□□ 0.88
GTF3A-202ENST00000419181 ZNF641Q96N77 438 aaPredicted RBP20.54■□□□□ 0.88
GTF3A-202ENST00000419181 CALN1Q9BXU9 219 aa20.54■□□□□ 0.88
GTF3A-202ENST00000419181 SUV39H2Q9H5I1 410 aa20.54■□□□□ 0.88
GTF3A-202ENST00000419181 SEPT3Q9UH03 358 aa20.54■□□□□ 0.88
GTF3A-202ENST00000419181 CHD8Q9HCK8 2581 aa20.54■□□□□ 0.88
GTF3A-202ENST00000419181 IGLON5A6NGN9 336 aa20.53■□□□□ 0.88
GTF3A-202ENST00000419181 NEMP1O14524 444 aa20.53■□□□□ 0.88
GTF3A-202ENST00000419181 MFSD11O43934 449 aa20.53■□□□□ 0.88
GTF3A-202ENST00000419181 LCA5LO95447 670 aa20.53■□□□□ 0.88
GTF3A-202ENST00000419181 PAK4O96013 591 aaPredicted RBP20.53■□□□□ 0.88
GTF3A-202ENST00000419181 SUOXP51687 545 aa20.53■□□□□ 0.88
GTF3A-202ENST00000419181 IL9RQ01113 521 aa20.53■□□□□ 0.88
GTF3A-202ENST00000419181 TRIP6Q15654 476 aaKnown RBP20.53■□□□□ 0.88
GTF3A-202ENST00000419181 ANKRD20A8PQ5CZ79 823 aa20.53■□□□□ 0.88
GTF3A-202ENST00000419181 NCBP2-AS2Q69YL0 99 aa20.53■□□□□ 0.88
GTF3A-202ENST00000419181 GCNT7Q6ZNI0 430 aa20.53■□□□□ 0.88
GTF3A-202ENST00000419181 ABI3BPQ7Z7G0 1075 aa20.53■□□□□ 0.88
GTF3A-202ENST00000419181 CAMK1DQ8IU85 385 aa20.53■□□□□ 0.88
GTF3A-202ENST00000419181 MAP7D3Q8IWC1 876 aa20.53■□□□□ 0.88
GTF3A-202ENST00000419181 ASB12Q8WXK4 309 aa20.53■□□□□ 0.88
GTF3A-202ENST00000419181 KLHDC7BQ96G42 594 aa20.53■□□□□ 0.88
GTF3A-202ENST00000419181 ATP13A3Q9H7F0 1226 aa20.53■□□□□ 0.88
GTF3A-202ENST00000419181 BTBD3Q9Y2F9 522 aa20.53■□□□□ 0.88
GTF3A-202ENST00000419181 TPRP12270 2363 aaKnown RBP20.52■□□□□ 0.88
GTF3A-202ENST00000419181 YKT6O15498 198 aa20.52■□□□□ 0.88
GTF3A-202ENST00000419181 THEGLP0DJG4 465 aa20.52■□□□□ 0.88
GTF3A-202ENST00000419181 ARRB1P49407 418 aaPredicted RBP20.52■□□□□ 0.88
GTF3A-202ENST00000419181 RENBPP51606 427 aa20.52■□□□□ 0.88
GTF3A-202ENST00000419181 CLDN2P57739 230 aa20.52■□□□□ 0.88
GTF3A-202ENST00000419181 PAFAH1B3Q15102 231 aaKnown RBP20.52■□□□□ 0.88
GTF3A-202ENST00000419181 BRAT1Q6PJG6 821 aa20.52■□□□□ 0.88
GTF3A-202ENST00000419181 LRRC49Q8IUZ0 686 aa20.52■□□□□ 0.88
GTF3A-202ENST00000419181 CCDC170Q8IYT3 715 aa20.52■□□□□ 0.88
GTF3A-202ENST00000419181 OXR1Q8N573 874 aa20.52■□□□□ 0.88
GTF3A-202ENST00000419181 PANX2Q96RD6 677 aa20.52■□□□□ 0.88
GTF3A-202ENST00000419181 KLF6Q99612 283 aaPredicted RBP20.52■□□□□ 0.88
GTF3A-202ENST00000419181 PCDHB9Q9Y5E1 797 aa20.52■□□□□ 0.88
GTF3A-202ENST00000419181 HS3ST3A1Q9Y663 406 aa20.52■□□□□ 0.88
GTF3A-202ENST00000419181 ACACBO00763 2458 aa20.52■□□□□ 0.88
GTF3A-202ENST00000419181 LRRK1Q38SD2 2015 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 RAD51BO15315 384 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 ITIH2P19823 946 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 FECHP22830 423 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 EPHA8P29322 1005 aaPredicted RBP20.51■□□□□ 0.87
GTF3A-202ENST00000419181 SERPINA4P29622 427 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 HSPA9P38646 679 aaKnown RBP20.51■□□□□ 0.87
GTF3A-202ENST00000419181 GRK6P43250 576 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 RXRGP48443 463 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 SCNN1BP51168 640 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 AP1S1P61966 158 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 SHC2P98077 582 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 GALNT2Q10471 571 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 FOXC1Q12948 553 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 SGCGQ13326 291 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 ZNF235Q14590 738 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 UGP2Q16851 508 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 GLRX5Q86SX6 157 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 ZSWIM9Q86XI8 627 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 PQLC3Q8N755 202 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 OR13H1Q8NG92 308 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 FAM174AQ8TBP5 190 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 RHBDD1Q8TEB9 315 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 SAP25Q8TEE9 199 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 RAPGEF5Q92565 580 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 ECHDC3Q96DC8 303 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 NSMCE3Q96MG7 304 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 LENG8Q96PV6 779 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms