RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 TMEM98Q9Y2Y6 226 aa11.81□□□□□ -0.52
DDR1-232ENST00000418800 RAP2CQ9Y3L5 183 aa11.81□□□□□ -0.52
DDR1-232ENST00000418800 ARAP2Q8WZ64 1704 aa11.81□□□□□ -0.52
DDR1-232ENST00000418800 SNX2O60749 519 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 MOCS2O96007 188 aaPredicted RBP11.8□□□□□ -0.52
DDR1-232ENST00000418800 TXNP10599 105 aaKnown RBP11.8□□□□□ -0.52
DDR1-232ENST00000418800 DPP6P42658 865 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 COPZ1P61923 177 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 MPP1Q00013 466 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 PRKCQQ04759 706 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 TUBB3Q13509 450 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 FAM91A1Q658Y4 838 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 NIPAL1Q6NVV3 410 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 LDB1Q86U70 411 aaPredicted RBP11.8□□□□□ -0.52
DDR1-232ENST00000418800 SLCO6A1Q86UG4 719 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 STK32CQ86UX6 486 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 IGFN1Q86VF2 1251 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 TTC30AQ86WT1 665 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 FSTL5Q8N475 847 aaPredicted RBP11.8□□□□□ -0.52
DDR1-232ENST00000418800 CALML6Q8TD86 181 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 FNIP1Q8TF40 1166 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 SDCCAG3Q96C92 435 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 SPATA33Q96N06 139 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 FCRL3Q96P31 734 aaPredicted RBP11.8□□□□□ -0.52
DDR1-232ENST00000418800 TCF12Q99081 682 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 DPP3Q9NY33 737 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 ITGB1BP2Q9UKP3 347 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 PCDHGA3Q9Y5H0 932 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 SNX10Q9Y5X0 201 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 NCF1BA6NI72 391 aaPredicted RBP11.8□□□□□ -0.52
DDR1-232ENST00000418800 NOTOA8MTQ0 251 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 NCF1CA8MVU1 366 aaPredicted RBP11.8□□□□□ -0.52
DDR1-232ENST00000418800 H0Y858 1186 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 PFDN6O15212 129 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 XYLBO75191 536 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 BCAS2O75934 225 aaPredicted RBP11.8□□□□□ -0.52
DDR1-232ENST00000418800 NCF1P14598 390 aaPredicted RBP11.8□□□□□ -0.52
DDR1-232ENST00000418800 ZNF26P17031 533 aaPredicted RBP11.8□□□□□ -0.52
DDR1-232ENST00000418800 YWHAQP27348 245 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 ELK4P28324 431 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 ADSLP30566 484 aaPredicted RBP11.8□□□□□ -0.52
DDR1-232ENST00000418800 SLC6A3Q01959 620 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 FPGSQ05932 587 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 PIGGQ5H8A4 983 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 GRTP1Q5TC63 336 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 ABRAXAS1Q6UWZ7 409 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 NIPA1Q7RTP0 329 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 FAM35AQ86V20 835 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 CHERPQ8IWX8 916 aaKnown RBP11.8□□□□□ -0.52
DDR1-232ENST00000418800 NIPA2Q8N8Q9 360 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 POC5Q8NA72 575 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 SHCBP1Q8NEM2 672 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 TBC1D15Q8TC07 691 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 TUBGCP3Q96CW5 907 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 RNF145Q96MT1 663 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 KCTD15Q96SI1 283 aaPredicted RBP11.8□□□□□ -0.52
DDR1-232ENST00000418800 CPNE1Q99829 537 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 CENPOQ9BU64 300 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.8□□□□□ -0.52
DDR1-232ENST00000418800 MID2Q9UJV3 735 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 PCDHGC3Q9UN70 934 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 GIT1Q9Y2X7 761 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 DLEC1Q9Y238 1755 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 ARFGEF1Q9Y6D6 1849 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 AURKAO14965 403 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 GABBR2O75899 941 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 NADKO95544 446 aaPredicted RBP11.8□□□□□ -0.52
DDR1-232ENST00000418800 MTHFD1P11586 935 aaKnown RBP11.8□□□□□ -0.52
DDR1-232ENST00000418800 CYP2C9P11712 490 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 CD151P48509 253 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 PRKAA2P54646 552 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 TPI1P60174 286 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 YWHAHQ04917 246 aaPredicted RBP11.8□□□□□ -0.52
DDR1-232ENST00000418800 NSUN2Q08J23 767 aaKnown RBP eCLIP11.8□□□□□ -0.52
DDR1-232ENST00000418800 LAMC2Q13753 1193 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 VPS26BQ4G0F5 336 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 CRTC3Q6UUV7 619 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 DCBLD1Q8N8Z6 715 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 SEPT1Q8WYJ6 367 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 EDEM1Q92611 657 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 SNX27Q96L92 541 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 DHRS1Q96LJ7 313 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 BIRC8Q96P09 236 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 FTHL17Q9BXU8 183 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 PLEKHA5Q9HAU0 1116 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 ADGRA2Q96PE1 1338 aa11.8□□□□□ -0.52
DDR1-232ENST00000418800 GPR25O00155 361 aa11.79□□□□□ -0.52
DDR1-232ENST00000418800 AP1G1O43747 822 aa11.79□□□□□ -0.52
DDR1-232ENST00000418800 CHRM3P20309 590 aa11.79□□□□□ -0.52
DDR1-232ENST00000418800 BCAT1P54687 386 aa11.79□□□□□ -0.52
DDR1-232ENST00000418800 PITX1P78337 314 aaPredicted RBP11.79□□□□□ -0.52
DDR1-232ENST00000418800 MERTKQ12866 999 aa11.79□□□□□ -0.52
DDR1-232ENST00000418800 CTU1Q7Z7A3 348 aaKnown RBP11.79□□□□□ -0.52
DDR1-232ENST00000418800 ZNF567Q8N184 647 aa11.79□□□□□ -0.52
DDR1-232ENST00000418800 GLT1D1Q96MS3 346 aa11.79□□□□□ -0.52
DDR1-232ENST00000418800 CITED4Q96RK1 184 aa11.79□□□□□ -0.52
DDR1-232ENST00000418800 FSD1LQ9BXM9 530 aa11.79□□□□□ -0.52
DDR1-232ENST00000418800 CDT1Q9H211 546 aa11.79□□□□□ -0.52
DDR1-232ENST00000418800 DHX33Q9H6R0 707 aaKnown RBP11.79□□□□□ -0.52
DDR1-232ENST00000418800 HMG20AQ9NP66 347 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms