RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 SLC7A4O43246 635 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 ZMPSTE24O75844 475 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 POU2F2P09086 479 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 NEFHP12036 1026 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 ARNTP27540 789 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 CYTH1Q15438 398 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 FYB2Q5VWT5 728 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 ATG16L1Q676U5 607 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 RNF43Q68DV7 783 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 ZC3HC1Q86WB0 502 aaKnown RBP16.94■□□□□ 0.3
SSBP3-205ENST00000417664 C2CD4AQ8NCU7 369 aaPredicted RBP16.94■□□□□ 0.3
SSBP3-205ENST00000417664 BRSK1Q8TDC3 778 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 MICAL1Q8TDZ2 1067 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 ACDQ96AP0 544 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 TRIB3Q96RU7 358 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 C2orf49Q9BVC5 232 aaPredicted RBP16.94■□□□□ 0.3
SSBP3-205ENST00000417664 SCUBE2Q9NQ36 999 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 PCDH10Q9P2E7 1040 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 KLHL14Q9P2G3 628 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 XYLBO75191 536 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 ARF5P84085 180 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 ACVR1Q04771 509 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 CCDC153Q494R4 210 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 NEPROQ6NW34 567 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 ELMSAN1Q6PJG2 1045 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 CCDC121Q6ZUS5 278 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 FAM47EQ6ZV65 393 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 MFN1Q8IWA4 741 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 ARMC2Q8NEN0 867 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 ZNF398Q8TD17 642 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 SLC22A17Q8WUG5 538 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 SLC46A2Q9BY10 475 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 NOD2Q9HC29 1040 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 SIRPGQ9P1W8 387 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 DNMT3BQ9UBC3 853 aaKnown RBP16.94■□□□□ 0.3
SSBP3-205ENST00000417664 VPS28Q9UK41 221 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 LEFTY2O00292 366 aa16.93■□□□□ 0.3
SSBP3-205ENST00000417664 TGDSO95455 350 aa16.93■□□□□ 0.3
SSBP3-205ENST00000417664 CYBBP04839 570 aa16.93■□□□□ 0.3
SSBP3-205ENST00000417664 GLDCP23378 1020 aa16.93■□□□□ 0.3
SSBP3-205ENST00000417664 AVPR1AP37288 418 aa16.93■□□□□ 0.3
SSBP3-205ENST00000417664 SCNN1BP51168 640 aa16.93■□□□□ 0.3
SSBP3-205ENST00000417664 SLC12A1Q13621 1099 aa16.93■□□□□ 0.3
SSBP3-205ENST00000417664 RETSATQ6NUM9 610 aa16.93■□□□□ 0.3
SSBP3-205ENST00000417664 SRLQ86TD4 932 aa16.93■□□□□ 0.3
SSBP3-205ENST00000417664 OTUD6BQ8N6M0 293 aa16.93■□□□□ 0.3
SSBP3-205ENST00000417664 DDI1Q8WTU0 396 aa16.93■□□□□ 0.3
SSBP3-205ENST00000417664 ALG14Q96F25 216 aa16.93■□□□□ 0.3
SSBP3-205ENST00000417664 C17orf80Q9BSJ5 609 aa16.93■□□□□ 0.3
SSBP3-205ENST00000417664 C12orf65Q9H3J6 166 aaKnown RBP16.93■□□□□ 0.3
SSBP3-205ENST00000417664 KDM4CQ9H3R0 1056 aa16.93■□□□□ 0.3
SSBP3-205ENST00000417664 MFSD1Q9H3U5 465 aa16.93■□□□□ 0.3
SSBP3-205ENST00000417664 TASP1Q9H6P5 420 aa16.93■□□□□ 0.3
SSBP3-205ENST00000417664 MAN1C1Q9NR34 630 aa16.93■□□□□ 0.3
SSBP3-205ENST00000417664 KIAA1522Q9P206 1035 aaPredicted RBP16.93■□□□□ 0.3
SSBP3-205ENST00000417664 SLC2A6Q9UGQ3 507 aa16.93■□□□□ 0.3
SSBP3-205ENST00000417664 ANKRD6Q9Y2G4 727 aa16.93■□□□□ 0.3
SSBP3-205ENST00000417664 MTO1Q9Y2Z2 717 aaKnown RBP16.93■□□□□ 0.3
SSBP3-205ENST00000417664 WDR91A4D1P6 747 aa16.92■□□□□ 0.3
SSBP3-205ENST00000417664 LDB2O43679 373 aa16.92■□□□□ 0.3
SSBP3-205ENST00000417664 TMCC1O94876 653 aa16.92■□□□□ 0.3
SSBP3-205ENST00000417664 AHSGP02765 367 aa16.92■□□□□ 0.3
SSBP3-205ENST00000417664 BPGMP07738 259 aa16.92■□□□□ 0.3
SSBP3-205ENST00000417664 TROVE2P10155 538 aaKnown RBP eCLIP16.92■□□□□ 0.3
SSBP3-205ENST00000417664 COL6A2P12110 1019 aa16.92■□□□□ 0.3
SSBP3-205ENST00000417664 CSRP3P50461 194 aa16.92■□□□□ 0.3
SSBP3-205ENST00000417664 FSCBQ5H9T9 825 aa16.92■□□□□ 0.3
SSBP3-205ENST00000417664 GPR158Q5T848 1215 aa16.92■□□□□ 0.3
SSBP3-205ENST00000417664 CGB2Q6NT52 195 aa16.92■□□□□ 0.3
SSBP3-205ENST00000417664 NUDCD3Q8IVD9 361 aa16.92■□□□□ 0.3
SSBP3-205ENST00000417664 BBS7Q8IWZ6 715 aa16.92■□□□□ 0.3
SSBP3-205ENST00000417664 CMTM8Q8IZV2 173 aa16.92■□□□□ 0.3
SSBP3-205ENST00000417664 GBP7Q8N8V2 638 aaPredicted RBP16.92■□□□□ 0.3
SSBP3-205ENST00000417664 ZNF557Q8N988 423 aaPredicted RBP16.92■□□□□ 0.3
SSBP3-205ENST00000417664 CCDC63Q8NA47 563 aa16.92■□□□□ 0.3
SSBP3-205ENST00000417664 FIBINQ8TAL6 211 aa16.92■□□□□ 0.3
SSBP3-205ENST00000417664 SHKBP1Q8TBC3 707 aa16.92■□□□□ 0.3
SSBP3-205ENST00000417664 STYXQ8WUJ0 223 aa16.92■□□□□ 0.3
SSBP3-205ENST00000417664 USP13Q92995 863 aaPredicted RBP16.92■□□□□ 0.3
SSBP3-205ENST00000417664 TSSK1BQ9BXA7 367 aa16.92■□□□□ 0.3
SSBP3-205ENST00000417664 ADGRE3Q9BY15 652 aa16.92■□□□□ 0.3
SSBP3-205ENST00000417664 SLCO1B3Q9NPD5 702 aa16.92■□□□□ 0.3
SSBP3-205ENST00000417664 ZDHHC7Q9NXF8 308 aa16.92■□□□□ 0.3
SSBP3-205ENST00000417664 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.92■□□□□ 0.32e-7■□□□□ 10.3
SSBP3-205ENST00000417664 FBXO5Q9UKT4 447 aa16.92■□□□□ 0.3
SSBP3-205ENST00000417664 RRP15Q9Y3B9 282 aaKnown RBP16.92■□□□□ 0.3
SSBP3-205ENST00000417664 A0A096LPK6 155 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 TTC24A2A3L6 582 aaPredicted RBP16.91■□□□□ 0.3
SSBP3-205ENST00000417664 CCDC78A2IDD5 438 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 CCT8L1PA6NM43 557 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 GOLGA8TH3BQL2 631 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 PLIN3O60664 434 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 CRTAMO95727 393 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 CD160O95971 181 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 SYN1P17600 705 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 MZF1P28698 734 aaPredicted RBP16.91■□□□□ 0.3
SSBP3-205ENST00000417664 CD151P48509 253 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 SLC20A2Q08357 652 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 N4BP2L1Q5TBK1 243 aaPredicted RBP16.91■□□□□ 0.3
SSBP3-205ENST00000417664 OTOAQ7RTW8 1153 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms