RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 TKTP29401 623 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 RBMS1P29558 406 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 LSP1P33241 339 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 MAN1A1P33908 653 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 TRHRP34981 398 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 CLK1P49759 484 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 IL9RQ01113 521 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 SLFN5Q08AF3 891 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 CBX3Q13185 183 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 ITGB3BPQ13352 177 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 PLD1Q13393 1074 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 XRCC4Q13426 336 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 TRIM29Q14134 588 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 PCBP2Q15366 365 aaKnown RBP eCLIP5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 KIF19Q2TAC6 998 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 MUM1Q2TAK8 710 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 CCDC153Q494R4 210 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 C4orf46Q504U0 113 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 COBLL1Q53SF7 1204 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 CFAP157Q5JU67 520 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 THEMIS2Q5TEJ8 643 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 TSHZ3Q63HK5 1081 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 TPGS2Q68CL5 300 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 ESRP1Q6NXG1 681 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 USP17L6PQ6QN14 398 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 WDR75Q8IWA0 830 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 CHPFQ8IZ52 775 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 NLGN4XQ8N0W4 816 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 ARHGAP18Q8N392 663 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 ZNF610Q8N9Z0 462 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 SPC24Q8NBT2 197 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 C1orf162Q8NEQ5 155 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 NCSTNQ92542 709 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 ATP2A3Q93084 1043 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 NLRP4Q96MN2 994 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 JAKMIP1Q96N16 626 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 FAM192AQ9GZU8 254 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 TASP1Q9H6P5 420 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 TMEM165Q9HC07 324 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 TRMT1Q9NXH9 659 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 WDR35Q9P2L0 1181 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 SEL1LQ9UBV2 794 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 HESX1Q9UBX0 185 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 ADAMTS6Q9UKP5 1117 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 MAFFQ9ULX9 164 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 VPS4AQ9UN37 437 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 HES2Q9Y543 173 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 YIPF1Q9Y548 306 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 ATP23Q9Y6H3 246 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 SCINQ9Y6U3 715 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 CELSR1Q9NYQ6 3014 aa5.69□□□□□ -1.5
ECHDC1-206ENST00000417628 ARHGAP10A1A4S6 786 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 KIAA1324LA8MWY0 1029 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 KLRF2D3W0D1 207 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 HGSO14964 777 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 EIF3HO15372 352 aaKnown RBP eCLIP5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 ADAM23O75077 832 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 HIP1RO75146 1068 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 USP12O75317 370 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 C4BPAP04003 597 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 LINGO3P0C6S8 592 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 NCAM1P13591 858 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 HOXA11P31270 313 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 SSTR4P31391 388 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 CSNK1EP49674 416 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 AFF3P51826 1226 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 TBX4P57082 545 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 EVCP57679 992 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 CCZ1BP86790 482 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 CCZ1P86791 482 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 CYP4F8P98187 520 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 BFSP1Q12934 665 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 TUBA3CQ13748 450 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 MORC3Q14149 939 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 PDCD1Q15116 288 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 ADRM1Q16186 407 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 BEND6Q5SZJ8 279 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 BICRALQ6AI39 1079 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 ADALQ6DHV7 355 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 NEPROQ6NW34 567 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 CYB5D1Q6P9G0 228 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 RBM43Q6ZSC3 357 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 GAREM2Q75VX8 874 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 TAOK1Q7L7X3 1001 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 KANSL1Q7Z3B3 1105 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 TMC6Q7Z403 805 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 KRT77Q7Z794 578 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 C14orf80Q86SX3 495 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 RHPN2Q8IUC4 686 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 LRRC8AQ8IWT6 810 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 TTC30BQ8N4P2 665 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 OXR1Q8N573 874 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 KBTBD3Q8NAB2 608 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 NSUN7Q8NE18 718 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 CCDC110Q8TBZ0 833 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 GFM2Q969S9 779 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 CENPTQ96BT3 561 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 HVCN1Q96D96 273 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 GCNAQ96QF7 691 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 PIGSQ96S52 555 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms