RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 DNAAF5Q86Y56 855 aa17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 PSTKQ8IV42 348 aaKnown RBP17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 NETO2Q8NC67 525 aa17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 CXorf40AQ8TE69 158 aa17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 NXPE2Q96DL1 559 aa17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 TRIM11Q96F44 468 aa17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 C1QTNF7Q9BXJ2 289 aa17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 EVA1BQ9NVM1 165 aa17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 CNOT8Q9UFF9 292 aaKnown RBP17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 PCSK1NQ9UHG2 260 aa17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 CSNK1G3Q9Y6M4 447 aa17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 SCINQ9Y6U3 715 aa17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 SPEGQ15772 3267 aa17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 MYLKQ15746 1914 aa17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 CFAP47Q6ZTR5 3102 aa17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 ADAMTS20P59510 1910 aa17.79■□□□□ 0.44
PDLIM2-208ENST00000416159 DDX3XO00571 662 aaKnown RBP eCLIP17.79■□□□□ 0.449e-11■■■■■ 33.8
PDLIM2-208ENST00000416159 TOR1BO14657 336 aa17.79■□□□□ 0.44
PDLIM2-208ENST00000416159 PRPSAP2O60256 369 aa17.79■□□□□ 0.44
PDLIM2-208ENST00000416159 PRAMEF11O60813 436 aa17.79■□□□□ 0.44
PDLIM2-208ENST00000416159 MMP20O60882 483 aa17.79■□□□□ 0.44
PDLIM2-208ENST00000416159 CKMT1AP12532 417 aa17.79■□□□□ 0.44
PDLIM2-208ENST00000416159 NME1P15531 152 aaKnown RBP17.79■□□□□ 0.44
PDLIM2-208ENST00000416159 DUSP3P51452 185 aaPredicted RBP17.79■□□□□ 0.44
PDLIM2-208ENST00000416159 ELP6Q0PNE2 266 aa17.79■□□□□ 0.44
PDLIM2-208ENST00000416159 PTK2BQ14289 1009 aa17.79■□□□□ 0.44
PDLIM2-208ENST00000416159 NR1I3Q14994 352 aa17.79■□□□□ 0.44
PDLIM2-208ENST00000416159 CA9Q16790 459 aa17.79■□□□□ 0.44
PDLIM2-208ENST00000416159 FIGNQ5HY92 759 aa17.79■□□□□ 0.44
PDLIM2-208ENST00000416159 ARFGAP1Q8N6T3 406 aa17.79■□□□□ 0.44
PDLIM2-208ENST00000416159 FAM181AQ8N9Y4 354 aa17.79■□□□□ 0.44
PDLIM2-208ENST00000416159 CENPTQ96BT3 561 aa17.79■□□□□ 0.44
PDLIM2-208ENST00000416159 FUCA2Q9BTY2 467 aa17.79■□□□□ 0.44
PDLIM2-208ENST00000416159 SNRNP25Q9BV90 132 aaKnown RBP17.79■□□□□ 0.44
PDLIM2-208ENST00000416159 SLC39A8Q9C0K1 460 aa17.79■□□□□ 0.44
PDLIM2-208ENST00000416159 NRSN2Q9GZP1 204 aa17.79■□□□□ 0.44
PDLIM2-208ENST00000416159 PDFQ9HBH1 243 aa17.79■□□□□ 0.44
PDLIM2-208ENST00000416159 USP29Q9HBJ7 922 aa17.79■□□□□ 0.44
PDLIM2-208ENST00000416159 MRPL47Q9HD33 250 aaKnown RBP17.79■□□□□ 0.44
PDLIM2-208ENST00000416159 ANKRD11Q6UB99 2663 aaPredicted RBP17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 J3KR12 359 aa17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 K7ESM1 405 aa17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 INSIG1O15503 277 aa17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 MYBL1P10243 752 aa17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 MIPP30301 263 aa17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 CSNK1DP48730 415 aa17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 PAPOLAP51003 745 aaKnown RBP17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 YPEL5P62699 121 aa17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 TPM4P67936 248 aa17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 INSM1Q01101 510 aaPredicted RBP17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 TMEM52BQ4KMG9 183 aa17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 LRRC73Q5JTD7 316 aa17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 E4F1Q66K89 784 aaPredicted RBP17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 C19orf48Q6RUI8 117 aa17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 RFX8Q6ZV50 586 aa17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 VPS36Q86VN1 386 aa17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 BTN2A2Q8WVV5 523 aa17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 ZNF653Q96CK0 615 aa17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 CELF6Q96J87 481 aaKnown RBP17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 APOLD1Q96LR9 279 aa17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 ZNF641Q96N77 438 aaPredicted RBP17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 PEBP4Q96S96 227 aa17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 KCTD15Q96SI1 283 aaPredicted RBP17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 SUV39H2Q9H5I1 410 aa17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 SCUBE2Q9NQ36 999 aa17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 CLCA2Q9UQC9 943 aa17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 ASPMQ8IZT6 3477 aa17.78■□□□□ 0.44
PDLIM2-208ENST00000416159 DMXL2Q8TDJ6 3036 aa17.77■□□□□ 0.44
PDLIM2-208ENST00000416159 TSPAN11A1L157 253 aa17.77■□□□□ 0.44
PDLIM2-208ENST00000416159 RIOK3O14730 519 aaKnown RBP17.77■□□□□ 0.44
PDLIM2-208ENST00000416159 PIGNO95427 931 aa17.77■□□□□ 0.44
PDLIM2-208ENST00000416159 MT-CO3P00414 261 aa17.77■□□□□ 0.44
PDLIM2-208ENST00000416159 SKILP12757 684 aa17.77■□□□□ 0.44
PDLIM2-208ENST00000416159 JUNDP17535 347 aa17.77■□□□□ 0.44
PDLIM2-208ENST00000416159 ERCC2P18074 760 aa17.77■□□□□ 0.44
PDLIM2-208ENST00000416159 IGFALSP35858 605 aa17.77■□□□□ 0.44
PDLIM2-208ENST00000416159 HCAR3P49019 387 aa17.77■□□□□ 0.44
PDLIM2-208ENST00000416159 THOP1P52888 689 aa17.77■□□□□ 0.44
PDLIM2-208ENST00000416159 EIF2B5Q13144 721 aaKnown RBP17.77■□□□□ 0.44
PDLIM2-208ENST00000416159 RTP5Q14D33 572 aa17.77■□□□□ 0.44
PDLIM2-208ENST00000416159 ACAP1Q15027 740 aa17.77■□□□□ 0.44
PDLIM2-208ENST00000416159 ZNF548Q8NEK5 533 aaPredicted RBP17.77■□□□□ 0.44
PDLIM2-208ENST00000416159 EXOC2Q96KP1 924 aa17.77■□□□□ 0.44
PDLIM2-208ENST00000416159 TUBGCP5Q96RT8 1024 aa17.77■□□□□ 0.44
PDLIM2-208ENST00000416159 ISCUQ9H1K1 167 aa17.77■□□□□ 0.44
PDLIM2-208ENST00000416159 CAAP1Q9H8G2 361 aa17.77■□□□□ 0.44
PDLIM2-208ENST00000416159 SPASTQ9UBP0 616 aa17.77■□□□□ 0.44
PDLIM2-208ENST00000416159 AK5Q9Y6K8 562 aa17.77■□□□□ 0.44
PDLIM2-208ENST00000416159 AQP9O43315 295 aa17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 LRCH4O75427 683 aa17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 PALMO75781 387 aa17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 NEBLO76041 1014 aa17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 GP1BAP07359 652 aa17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 ITIH2P19823 946 aa17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 PCK1P35558 622 aa17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 RFTN1Q14699 578 aaPredicted RBP17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 UGP2Q16851 508 aa17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 KLHL40Q2TBA0 621 aa17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 PPP6R3Q5H9R7 873 aaPredicted RBP17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 TPRG1LQ5T0D9 272 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms