RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 FZD3Q9NPG1 666 aa9.75□□□□□ -0.85
LINC01090-201ENST00000415357 TM7SF3Q9NS93 570 aa9.75□□□□□ -0.85
LINC01090-201ENST00000415357 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.75□□□□□ -0.85
LINC01090-201ENST00000415357 CWC15Q9P013 229 aaKnown RBP9.75□□□□□ -0.85
LINC01090-201ENST00000415357 LHX3Q9UBR4 397 aa9.75□□□□□ -0.85
LINC01090-201ENST00000415357 TP53BP1Q12888 1972 aaPredicted RBP9.74□□□□□ -0.85
LINC01090-201ENST00000415357 ZSCAN5CA6NGD5 496 aaPredicted RBP9.74□□□□□ -0.85
LINC01090-201ENST00000415357 DFFAO00273 331 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 SLC31A1O15431 190 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 INSIG1O15503 277 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 MFAP3LO75121 409 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 PCDH8O95206 1070 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 TOP3BO95985 862 aaKnown RBP9.74□□□□□ -0.85
LINC01090-201ENST00000415357 GSRP00390 522 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 IL2RAP01589 272 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 UGT2B4P06133 528 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 RARAP10276 462 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 CEACAM1P13688 526 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 ADRB3P13945 408 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 ITGB7P26010 798 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 CD38P28907 300 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 PMLP29590 882 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 HTR7P34969 479 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 PCK1P35558 622 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 GJC1P36383 396 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 PAPOLAP51003 745 aaKnown RBP9.74□□□□□ -0.85
LINC01090-201ENST00000415357 NEK3P51956 506 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 C21orf59P57076 290 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 RHOAP61586 193 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 SNRPD1P62314 119 aaKnown RBP9.74□□□□□ -0.85
LINC01090-201ENST00000415357 SLC25A11Q02978 314 aaKnown RBP9.74□□□□□ -0.85
LINC01090-201ENST00000415357 CLN3Q13286 438 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 DPYSQ14117 519 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 TRIM14Q14142 442 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 CYTH1Q15438 398 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 ASTE1Q2TB18 679 aaPredicted RBP9.74□□□□□ -0.85
LINC01090-201ENST00000415357 SEL1L3Q68CR1 1132 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 NAPEPLDQ6IQ20 393 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 IL27RAQ6UWB1 636 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 PRPF39Q86UA1 669 aaKnown RBP9.74□□□□□ -0.85
LINC01090-201ENST00000415357 TRIM69Q86WT6 500 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 NIPA2Q8N8Q9 360 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 OR8K1Q8NGG5 319 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 ZNF564Q8TBZ8 553 aaPredicted RBP9.74□□□□□ -0.85
LINC01090-201ENST00000415357 RNF217Q8TC41 542 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 PPP1R16AQ96I34 528 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 KLHL32Q96NJ5 620 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 CHP1Q99653 195 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 HDAC8Q9BY41 377 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 SLC32A1Q9H598 525 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 PDFQ9HBH1 243 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 ETNK1Q9HBU6 452 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 PREBQ9HCU5 417 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 ABHD10Q9NUJ1 306 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 SPTLC3Q9NUV7 552 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 ETNK2Q9NVF9 386 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 UBA2Q9UBT2 640 aaPredicted RBP9.74□□□□□ -0.85
LINC01090-201ENST00000415357 GGT7Q9UJ14 662 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 ZFR2Q9UPR6 939 aaKnown RBP9.74□□□□□ -0.85
LINC01090-201ENST00000415357 ITM2BQ9Y287 266 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 BTBD3Q9Y2F9 522 aa9.74□□□□□ -0.85
LINC01090-201ENST00000415357 ARHGAP42A6NI28 874 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 C16orf96A6NNT2 1141 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 UPK3BL1B0FP48 263 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 EIF3CLB5ME19 914 aaKnown RBP9.73□□□□□ -0.85
LINC01090-201ENST00000415357 UPK3BL2E5RIL1 263 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 H3BRJ5 948 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 VILLO15195 856 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 PRAMEF11O60813 436 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 PIGNO95427 931 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 IGSF6O95976 241 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 CD48P09326 243 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 ITIH2P19823 946 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 SPINK2P20155 84 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 AMPD1P23109 780 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 SSR1P43307 286 aaKnown RBP9.73□□□□□ -0.85
LINC01090-201ENST00000415357 RGRP47804 291 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 NDST2P52849 883 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 GDF10P55107 478 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 SIM1P81133 766 aaPredicted RBP9.73□□□□□ -0.85
LINC01090-201ENST00000415357 SLC14A1Q13336 389 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 PIGHQ14442 188 aaPredicted RBP9.73□□□□□ -0.85
LINC01090-201ENST00000415357 DPYSL2Q16555 572 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 SLC18A3Q16572 532 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 ZNF423Q2M1K9 1284 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 ZNF284Q2VY69 593 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 MYLK3Q32MK0 819 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 SETMARQ53H47 684 aaPredicted RBP9.73□□□□□ -0.85
LINC01090-201ENST00000415357 AFMIDQ63HM1 303 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 HORMAD1Q86X24 394 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 PSTKQ8IV42 348 aaKnown RBP9.73□□□□□ -0.85
LINC01090-201ENST00000415357 SETD7Q8WTS6 366 aaKnown RBP9.73□□□□□ -0.85
LINC01090-201ENST00000415357 GDAP1L1Q96MZ0 367 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 CSPG4P5Q96PW8 444 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 EIF3CQ99613 913 aaKnown RBP9.73□□□□□ -0.85
LINC01090-201ENST00000415357 DEF6Q9H4E7 631 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 CAAP1Q9H8G2 361 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 PCDH18Q9HCL0 1135 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 KLHL11Q9NVR0 708 aa9.73□□□□□ -0.85
LINC01090-201ENST00000415357 CTTNBP2NLQ9P2B4 639 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms