RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 KDELC2Q7Z4H8 507 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 AHI1Q8N157 1196 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 PHTF2Q8N3S3 785 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 ATP11CQ8NB49 1132 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 ZNF483Q8TF39 744 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-202ENST00000414700 APOL2Q9BQE5 337 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 MGME1Q9BQP7 344 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 TM6SF2Q9BZW4 377 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 CIPCQ9C0C6 399 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 POLR1EQ9GZS1 481 aaKnown RBP15.72■□□□□ 0.11
SHMT2-202ENST00000414700 SPATS2LQ9NUQ6 558 aaKnown RBP15.72■□□□□ 0.11
SHMT2-202ENST00000414700 DEC1Q9P2X7 70 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 LHX3Q9UBR4 397 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 COL4A2P08572 1712 aa15.71■□□□□ 0.11
SHMT2-202ENST00000414700 KLHL33A6NCF5 533 aa15.71■□□□□ 0.11
SHMT2-202ENST00000414700 CCT8L1PA6NM43 557 aa15.71■□□□□ 0.11
SHMT2-202ENST00000414700 PMPCBO75439 489 aa15.71■□□□□ 0.11
SHMT2-202ENST00000414700 SRCP12931 536 aa15.71■□□□□ 0.11
SHMT2-202ENST00000414700 BMP1P13497 986 aa15.71■□□□□ 0.11
SHMT2-202ENST00000414700 NR1H3Q13133 447 aa15.71■□□□□ 0.11
SHMT2-202ENST00000414700 FASTKD3Q14CZ7 662 aaKnown RBP15.71■□□□□ 0.11
SHMT2-202ENST00000414700 UAP1Q16222 522 aaPredicted RBP15.71■□□□□ 0.11
SHMT2-202ENST00000414700 INO80DQ53TQ3 878 aaPredicted RBP15.71■□□□□ 0.11
SHMT2-202ENST00000414700 DGKKQ5KSL6 1271 aa15.71■□□□□ 0.11
SHMT2-202ENST00000414700 ATXN7L2Q5T6C5 722 aaPredicted RBP15.71■□□□□ 0.11
SHMT2-202ENST00000414700 CPLX4Q7Z7G2 160 aa15.71■□□□□ 0.11
SHMT2-202ENST00000414700 CAND1Q86VP6 1230 aaKnown RBP15.71■□□□□ 0.11
SHMT2-202ENST00000414700 HOOK3Q86VS8 718 aa15.71■□□□□ 0.11
SHMT2-202ENST00000414700 AGGF1Q8N302 714 aaeCLIP15.71■□□□□ 0.11
SHMT2-202ENST00000414700 SLC44A3Q8N4M1 653 aa15.71■□□□□ 0.11
SHMT2-202ENST00000414700 ZCCHC9Q8N567 271 aaKnown RBP15.71■□□□□ 0.11
SHMT2-202ENST00000414700 IMP4Q96G21 291 aaKnown RBP15.71■□□□□ 0.11
SHMT2-202ENST00000414700 SERPINB12Q96P63 405 aa15.71■□□□□ 0.11
SHMT2-202ENST00000414700 SLC25A51Q9H1U9 297 aa15.71■□□□□ 0.11
SHMT2-202ENST00000414700 BAIAP2L1Q9UHR4 511 aa15.71■□□□□ 0.11
SHMT2-202ENST00000414700 SLC27A6Q9Y2P4 619 aa15.71■□□□□ 0.11
SHMT2-202ENST00000414700 C15orf41Q9Y2V0 281 aa15.71■□□□□ 0.11
SHMT2-202ENST00000414700 AP2A1O95782 977 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 CR2P20023 1033 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 TPSB2P20231 275 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 SCNN1BP51168 640 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 ECT2LQ008S8 904 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 CAV1Q03135 178 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 RFTN1Q14699 578 aaPredicted RBP15.7■□□□□ 0.1
SHMT2-202ENST00000414700 TPSAB1Q15661 275 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 PCSK7Q16549 785 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 KIRREL3Q8IZU9 778 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 ZNF557Q8N988 423 aaPredicted RBP15.7■□□□□ 0.1
SHMT2-202ENST00000414700 OR6K2Q8NGY2 324 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 MAFAQ8NHW3 353 aaPredicted RBP15.7■□□□□ 0.1
SHMT2-202ENST00000414700 STAMBPL1Q96FJ0 436 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 MYO19Q96H55 970 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 SH3GL3Q99963 347 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 TNKS2Q9H2K2 1166 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 CNOT10Q9H9A5 744 aaKnown RBP15.7■□□□□ 0.1
SHMT2-202ENST00000414700 ZDHHC4Q9NPG8 344 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 HS3ST2Q9Y278 367 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 TCF20Q9UGU0 1960 aaKnown RBP15.7■□□□□ 0.1
SHMT2-202ENST00000414700 MYLKQ15746 1914 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 CFAP73A6NFT4 308 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 NARSO43776 548 aaKnown RBP15.7■□□□□ 0.1
SHMT2-202ENST00000414700 POLR2EP19388 210 aaKnown RBP15.7■□□□□ 0.1
SHMT2-202ENST00000414700 DHX9Q08211 1270 aaKnown RBP15.7■□□□□ 0.1
SHMT2-202ENST00000414700 PTPRNQ16849 979 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 ALG1LQ6GMV1 187 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 GRAMD4Q6IC98 578 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 TXNDC11Q6PKC3 985 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 TMC3Q7Z5M5 1100 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 KLHDC8BQ8IXV7 354 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 CCDC63Q8NA47 563 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 CCDC197Q8NCU1 140 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 IPMKQ8NFU5 416 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 TTC17Q96AE7 1141 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 MRGPRX3Q96LB0 322 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 MRGPRX2Q96LB1 330 aa15.7■□□□□ 0.1
SHMT2-202ENST00000414700 WDR83Q9BRX9 315 aaKnown RBP15.7■□□□□ 0.1
SHMT2-202ENST00000414700 MTRF1LQ9UGC7 380 aaKnown RBP15.7■□□□□ 0.1
SHMT2-202ENST00000414700 AGTP01019 485 aa15.69■□□□□ 0.1
SHMT2-202ENST00000414700 GKP32189 559 aa15.69■□□□□ 0.1
SHMT2-202ENST00000414700 RHOAP61586 193 aa15.69■□□□□ 0.1
SHMT2-202ENST00000414700 DMC1Q14565 340 aa15.69■□□□□ 0.1
SHMT2-202ENST00000414700 HIF1AQ16665 826 aa15.69■□□□□ 0.1
SHMT2-202ENST00000414700 BBS5Q8N3I7 341 aa15.69■□□□□ 0.1
SHMT2-202ENST00000414700 ZNF366Q8N895 744 aa15.69■□□□□ 0.1
SHMT2-202ENST00000414700 TERB1Q8NA31 727 aa15.69■□□□□ 0.1
SHMT2-202ENST00000414700 OR52K1Q8NGK4 314 aa15.69■□□□□ 0.1
SHMT2-202ENST00000414700 OR2W6PQ8NHA6 318 aa15.69■□□□□ 0.1
SHMT2-202ENST00000414700 RNF217Q8TC41 542 aa15.69■□□□□ 0.1
SHMT2-202ENST00000414700 CENPTQ96BT3 561 aa15.69■□□□□ 0.1
SHMT2-202ENST00000414700 EIF2B3Q9NR50 452 aaKnown RBP15.69■□□□□ 0.1
SHMT2-202ENST00000414700 HEBP1Q9NRV9 189 aa15.69■□□□□ 0.1
SHMT2-202ENST00000414700 SLC12A4Q9UP95 1085 aa15.69■□□□□ 0.1
SHMT2-202ENST00000414700 ERVW-1Q9UQF0 538 aa15.69■□□□□ 0.1
SHMT2-202ENST00000414700 INSIG1O15503 277 aa15.68■□□□□ 0.1
SHMT2-202ENST00000414700 BNIP3LO60238 219 aa15.68■□□□□ 0.1
SHMT2-202ENST00000414700 CHRNA4P43681 627 aa15.68■□□□□ 0.1
SHMT2-202ENST00000414700 KDELC1Q6UW63 502 aa15.68■□□□□ 0.1
SHMT2-202ENST00000414700 TADA1Q96BN2 335 aa15.68■□□□□ 0.1
SHMT2-202ENST00000414700 SPDL1Q96EA4 605 aa15.68■□□□□ 0.1
SHMT2-202ENST00000414700 CHMP6Q96FZ7 201 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms