RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 MR1Q95460 341 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 RAD51AP1Q96B01 352 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 MRPL38Q96DV4 380 aaKnown RBP3.7□□□□□ -1.82
SF3B1-203ENST00000414174 KTI12Q96EK9 354 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-203ENST00000414174 MVB12AQ96EY5 273 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 TSPAN17Q96FV3 270 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 TMEM169Q96HH4 297 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 SCLYQ96I15 445 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 TPD52L3Q96J77 140 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 TRNT1Q96Q11 434 aaKnown RBP3.7□□□□□ -1.82
SF3B1-203ENST00000414174 KCNS3Q9BQ31 491 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 AARSD1Q9BTE6 412 aaKnown RBP3.7□□□□□ -1.82
SF3B1-203ENST00000414174 LRFN3Q9BTN0 628 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 CDADC1Q9BWV3 514 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 ANKRD2Q9GZV1 360 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 RIBC2Q9H4K1 309 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 LRRC40Q9H9A6 602 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 PCDH9Q9HC56 1237 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 NEK6Q9HC98 313 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 FBRSL1Q9HCM7 1045 aaKnown RBP3.7□□□□□ -1.82
SF3B1-203ENST00000414174 TREM1Q9NP99 234 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 LZTFL1Q9NQ48 299 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 C12orf4Q9NQ89 552 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 NRBP2Q9NSY0 501 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 THAP1Q9NVV9 213 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 SMPD3Q9NY59 655 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-203ENST00000414174 MRPL39Q9NYK5 338 aaKnown RBP3.7□□□□□ -1.82
SF3B1-203ENST00000414174 DTLQ9NZJ0 730 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 ATXN10Q9UBB4 475 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 DBF4Q9UBU7 674 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-203ENST00000414174 SERPINB13Q9UIV8 391 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 ZNF214Q9UL59 606 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-203ENST00000414174 SLC22A14Q9Y267 594 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 PCDHGA5Q9Y5G8 931 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 SPACA6W5XKT8 324 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 ADCY9O60503 1353 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 CPDO75976 1380 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-203ENST00000414174 SSU72P8A0A1W2PR75 194 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 GSAPA4D1B5 854 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 CCDC154A6NI56 674 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 IQCF5A8MTL0 148 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 B4E1Z4 1266 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 PRR23D1E9PI22 279 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-203ENST00000414174 SPECC1L-ADORA2AF8WAN1 911 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 AGRPO00253 132 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 DNM1LO00429 736 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 ZNF197O14709 1029 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 FGF10O15520 208 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-203ENST00000414174 CTIFO43310 598 aaKnown RBP3.69□□□□□ -1.82
SF3B1-203ENST00000414174 ECE2O60344 883 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 KRT36O76013 467 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 CIAO1O76071 339 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 CDK14O94921 469 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 PCDH8O95206 1070 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 DIRAS3O95661 229 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 FTCDO95954 541 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 SOD2P04179 222 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 TP53P04637 393 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-203ENST00000414174 LIPFP07098 398 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 CYC1P08574 325 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 HNRNPA1P09651 372 aaKnown RBP eCLIP3.69□□□□□ -1.82
SF3B1-203ENST00000414174 PRR23D2P0DMB1 279 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-203ENST00000414174 NCF1P14598 390 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-203ENST00000414174 IFNGR1P15260 489 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 VCLP18206 1134 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 CYP2B6P20813 491 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 SLC7A1P30825 629 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 MAT2AP31153 395 aaKnown RBP3.69□□□□□ -1.82
SF3B1-203ENST00000414174 ARL3P36405 182 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 CAPGP40121 348 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 PSMB10P40306 273 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 CRKLP46109 303 aaKnown RBP3.69□□□□□ -1.82
SF3B1-203ENST00000414174 ALDH7A1P49419 539 aaKnown RBP3.69□□□□□ -1.82
SF3B1-203ENST00000414174 AARSP49588 968 aaKnown RBP eCLIP3.69□□□□□ -1.82
SF3B1-203ENST00000414174 CCT4P50991 539 aaKnown RBP3.69□□□□□ -1.82
SF3B1-203ENST00000414174 UBE2HP62256 183 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 PRAMEP78395 509 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 CALCOCO2Q13137 446 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 CBFBQ13951 182 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 SF3B4Q15427 424 aaKnown RBP eCLIP3.69□□□□□ -1.821e-9■■■■□ 23.6
SF3B1-203ENST00000414174 STILQ15468 1287 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 TIGD6Q17RP2 521 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 TWISTNBQ3B726 338 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-203ENST00000414174 C10orf120Q5SQS8 335 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 ATAD3BQ5T9A4 648 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 TTC22Q5TAA0 569 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 DEPDC1Q5TB30 811 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 PRAMEF20Q5VT98 475 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 KRT40Q6A162 431 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 MFSD5Q6N075 450 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 TIGD7Q6NT04 549 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-203ENST00000414174 DPY19L2P1Q6NXN4 242 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 NFRKBQ6P4R8 1299 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 GALNT18Q6P9A2 607 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 TTC23LQ6PF05 361 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 CLEC17AQ6ZS10 378 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 PIK3AP1Q6ZUJ8 805 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 BBS12Q6ZW61 710 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 USP49Q70CQ1 688 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms