RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 BRAT1Q6PJG6 821 aa15.88■□□□□ 0.13
MCF2L-211ENST00000413354 SARM1Q6SZW1 724 aa15.88■□□□□ 0.13
MCF2L-211ENST00000413354 KYAT3Q6YP21 454 aaKnown RBP15.88■□□□□ 0.13
MCF2L-211ENST00000413354 GCNT7Q6ZNI0 430 aa15.88■□□□□ 0.13
MCF2L-211ENST00000413354 PTAR1Q7Z6K3 402 aaPredicted RBP15.88■□□□□ 0.13
MCF2L-211ENST00000413354 ABI3BPQ7Z7G0 1075 aa15.88■□□□□ 0.13
MCF2L-211ENST00000413354 TTC7BQ86TV6 843 aa15.88■□□□□ 0.13
MCF2L-211ENST00000413354 SPATS2Q86XZ4 545 aaKnown RBP15.88■□□□□ 0.13
MCF2L-211ENST00000413354 BBS5Q8N3I7 341 aa15.88■□□□□ 0.13
MCF2L-211ENST00000413354 CXorf40AQ8TE69 158 aa15.88■□□□□ 0.13
MCF2L-211ENST00000413354 SAP25Q8TEE9 199 aa15.88■□□□□ 0.13
MCF2L-211ENST00000413354 CCDC42Q96M95 316 aa15.88■□□□□ 0.13
MCF2L-211ENST00000413354 LENG8Q96PV6 779 aaPredicted RBP15.88■□□□□ 0.13
MCF2L-211ENST00000413354 ANP32EQ9BTT0 268 aa15.88■□□□□ 0.13
MCF2L-211ENST00000413354 SCNM1Q9BWG6 230 aa15.88■□□□□ 0.13
MCF2L-211ENST00000413354 ATP13A3Q9H7F0 1226 aa15.88■□□□□ 0.13
MCF2L-211ENST00000413354 SEPT3Q9UH03 358 aa15.88■□□□□ 0.13
MCF2L-211ENST00000413354 WASF3Q9UPY6 502 aa15.88■□□□□ 0.13
MCF2L-211ENST00000413354 CA5BQ9Y2D0 317 aa15.88■□□□□ 0.13
MCF2L-211ENST00000413354 NEUROG3Q9Y4Z2 214 aa15.88■□□□□ 0.13
MCF2L-211ENST00000413354 MAP1BP46821 2468 aaKnown RBP15.88■□□□□ 0.13
MCF2L-211ENST00000413354 PTPRBP23467 1997 aa15.87■□□□□ 0.13
MCF2L-211ENST00000413354 TSPAN11A1L157 253 aa15.87■□□□□ 0.13
MCF2L-211ENST00000413354 FPGTO14772 594 aa15.87■□□□□ 0.13
MCF2L-211ENST00000413354 PROSCO94903 275 aa15.87■□□□□ 0.13
MCF2L-211ENST00000413354 PIGNO95427 931 aa15.87■□□□□ 0.13
MCF2L-211ENST00000413354 AMPD1P23109 780 aa15.87■□□□□ 0.13
MCF2L-211ENST00000413354 SERPINA4P29622 427 aa15.87■□□□□ 0.13
MCF2L-211ENST00000413354 MAN1A1P33908 653 aa15.87■□□□□ 0.13
MCF2L-211ENST00000413354 HSPA9P38646 679 aaKnown RBP15.87■□□□□ 0.13
MCF2L-211ENST00000413354 RABIFP47224 123 aa15.87■□□□□ 0.13
MCF2L-211ENST00000413354 SHBQ15464 509 aa15.87■□□□□ 0.13
MCF2L-211ENST00000413354 PRAMEF14Q5SWL7 426 aa15.87■□□□□ 0.13
MCF2L-211ENST00000413354 RAB44Q7Z6P3 723 aaPredicted RBP15.87■□□□□ 0.13
MCF2L-211ENST00000413354 GATAD2AQ86YP4 633 aa15.87■□□□□ 0.13
MCF2L-211ENST00000413354 LRRC49Q8IUZ0 686 aa15.87■□□□□ 0.13
MCF2L-211ENST00000413354 ATPAF2Q8N5M1 289 aa15.87■□□□□ 0.13
MCF2L-211ENST00000413354 NETO2Q8NC67 525 aa15.87■□□□□ 0.13
MCF2L-211ENST00000413354 NSMCE1Q8WV22 266 aa15.87■□□□□ 0.13
MCF2L-211ENST00000413354 ADAMTS14Q8WXS8 1223 aa15.87■□□□□ 0.13
MCF2L-211ENST00000413354 VOPP1Q96AW1 172 aa15.87■□□□□ 0.13
MCF2L-211ENST00000413354 IFT43Q96FT9 208 aa15.87■□□□□ 0.13
MCF2L-211ENST00000413354 C1QTNF2Q9BXJ5 285 aa15.87■□□□□ 0.13
MCF2L-211ENST00000413354 CALN1Q9BXU9 219 aa15.87■□□□□ 0.13
MCF2L-211ENST00000413354 SUV39H2Q9H5I1 410 aa15.87■□□□□ 0.13
MCF2L-211ENST00000413354 KLHL11Q9NVR0 708 aa15.87■□□□□ 0.13
MCF2L-211ENST00000413354 ITM2BQ9Y287 266 aa15.87■□□□□ 0.13
MCF2L-211ENST00000413354 CEP295Q9C0D2 2601 aa15.87■□□□□ 0.13
MCF2L-211ENST00000413354 IGLON5A6NGN9 336 aa15.86■□□□□ 0.13
MCF2L-211ENST00000413354 AKR1B15C9JRZ8 316 aaPredicted RBP15.86■□□□□ 0.13
MCF2L-211ENST00000413354 INSIG1O15503 277 aa15.86■□□□□ 0.13
MCF2L-211ENST00000413354 HYAL3O43820 417 aaPredicted RBP15.86■□□□□ 0.13
MCF2L-211ENST00000413354 PAK4O96013 591 aaPredicted RBP15.86■□□□□ 0.13
MCF2L-211ENST00000413354 KRT7P08729 469 aa15.86■□□□□ 0.13
MCF2L-211ENST00000413354 ADKP55263 362 aaKnown RBP15.86■□□□□ 0.13
MCF2L-211ENST00000413354 AP1S1P61966 158 aa15.86■□□□□ 0.13
MCF2L-211ENST00000413354 NSUN2Q08J23 767 aaKnown RBP eCLIP15.86■□□□□ 0.13
MCF2L-211ENST00000413354 FGL2Q14314 439 aa15.86■□□□□ 0.13
MCF2L-211ENST00000413354 ZNF235Q14590 738 aa15.86■□□□□ 0.13
MCF2L-211ENST00000413354 LBRQ14739 615 aaKnown RBP15.86■□□□□ 0.13
MCF2L-211ENST00000413354 PDK2Q15119 407 aa15.86■□□□□ 0.13
MCF2L-211ENST00000413354 TXNRD3NBQ6F5E7 133 aa15.86■□□□□ 0.13
MCF2L-211ENST00000413354 ERAP2Q6P179 960 aa15.86■□□□□ 0.13
MCF2L-211ENST00000413354 SRLQ86TD4 932 aa15.86■□□□□ 0.13
MCF2L-211ENST00000413354 MAP7D3Q8IWC1 876 aa15.86■□□□□ 0.13
MCF2L-211ENST00000413354 RHOT2Q8IXI1 618 aa15.86■□□□□ 0.13
MCF2L-211ENST00000413354 PAF1Q8N7H5 531 aa15.86■□□□□ 0.13
MCF2L-211ENST00000413354 TSEN2Q8NCE0 465 aaKnown RBP15.86■□□□□ 0.13
MCF2L-211ENST00000413354 OR13H1Q8NG92 308 aa15.86■□□□□ 0.13
MCF2L-211ENST00000413354 FAM71BQ8TC56 605 aa15.86■□□□□ 0.13
MCF2L-211ENST00000413354 TSC1Q92574 1164 aa15.86■□□□□ 0.13
MCF2L-211ENST00000413354 ZNF670Q9BS34 389 aa15.86■□□□□ 0.13
MCF2L-211ENST00000413354 PACSIN1Q9BY11 444 aa15.86■□□□□ 0.13
MCF2L-211ENST00000413354 TRIM5Q9C035 493 aa15.86■□□□□ 0.13
MCF2L-211ENST00000413354 NHEJ1Q9H9Q4 299 aaPredicted RBP15.86■□□□□ 0.13
MCF2L-211ENST00000413354 GOLGA4Q13439 2230 aaKnown RBP15.86■□□□□ 0.13
MCF2L-211ENST00000413354 SPINT1O43278 529 aa15.85■□□□□ 0.13
MCF2L-211ENST00000413354 TM7SF2O76062 418 aa15.85■□□□□ 0.13
MCF2L-211ENST00000413354 TIMP2P16035 220 aa15.85■□□□□ 0.13
MCF2L-211ENST00000413354 GJC1P36383 396 aa15.85■□□□□ 0.13
MCF2L-211ENST00000413354 CLDN2P57739 230 aa15.85■□□□□ 0.13
MCF2L-211ENST00000413354 BCL2L1Q07817 233 aa15.85■□□□□ 0.13
MCF2L-211ENST00000413354 HS1BP3Q53T59 392 aa15.85■□□□□ 0.13
MCF2L-211ENST00000413354 ARHGAP36Q6ZRI8 547 aa15.85■□□□□ 0.13
MCF2L-211ENST00000413354 Q6ZSR6 202 aa15.85■□□□□ 0.13
MCF2L-211ENST00000413354 CHCHD4Q8N4Q1 142 aa15.85■□□□□ 0.13
MCF2L-211ENST00000413354 KCTD6Q8NC69 237 aa15.85■□□□□ 0.13
MCF2L-211ENST00000413354 PSKH2Q96QS6 385 aa15.85■□□□□ 0.13
MCF2L-211ENST00000413354 GPR27Q9NS67 375 aa15.85■□□□□ 0.13
MCF2L-211ENST00000413354 ETNK2Q9NVF9 386 aa15.85■□□□□ 0.13
MCF2L-211ENST00000413354 GGT7Q9UJ14 662 aa15.85■□□□□ 0.13
MCF2L-211ENST00000413354 MSRB2Q9Y3D2 182 aa15.85■□□□□ 0.13
MCF2L-211ENST00000413354 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.84■□□□□ 0.13
MCF2L-211ENST00000413354 TOR1BO14657 336 aa15.84■□□□□ 0.13
MCF2L-211ENST00000413354 ENC1O14682 589 aa15.84■□□□□ 0.13
MCF2L-211ENST00000413354 LDOC1O95751 146 aaPredicted RBP15.84■□□□□ 0.13
MCF2L-211ENST00000413354 TOP3BO95985 862 aaKnown RBP15.84■□□□□ 0.13
MCF2L-211ENST00000413354 ATXN1LP0C7T5 689 aaKnown RBP15.84■□□□□ 0.13
MCF2L-211ENST00000413354 CDK4P11802 303 aa15.84■□□□□ 0.13
MCF2L-211ENST00000413354 SPINK2P20155 84 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms