RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 SPECC1Q5M775 1068 aa4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 GPR139Q6DWJ6 353 aa4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 MIS18BP1Q6P0N0 1132 aa4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 CRIP3Q6Q6R5 217 aa4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 ZNF813Q6ZN06 617 aa4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 TICAM1Q8IUC6 712 aa4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 LRRC57Q8N9N7 239 aa4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 TXLNGYQ9BZA5 131 aa4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 SEMA4GQ9NTN9 838 aa4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 PLK2Q9NYY3 685 aa4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 SUCLA2Q9P2R7 463 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 A0A096LPK6 155 aa4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 TRBV5-7A0A0A0MS05 114 aa4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 A0A1W2PRG0 241 aa4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 KLRF2D3W0D1 207 aa4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 MATN3O15232 486 aa4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 RNMTO43148 476 aaKnown RBP4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 MT-CYBP00156 380 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 PRR35P0CG20 571 aa4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 PCNAP12004 261 aa4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 SAT1P21673 171 aa4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 PTGER1P34995 402 aa4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 AIMP2Q13155 320 aaKnown RBP4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 PRPF4BQ13523 1007 aaKnown RBP4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 RASA2Q15283 850 aa4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 KIAA0930Q6ICG6 404 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 NAA16Q6N069 864 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 HMBOX1Q6NT76 420 aa4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 LCTLQ6UWM7 567 aa4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 FAM83HQ6ZRV2 1179 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 FAM57BQ71RH2 274 aa4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 SERPINA11Q86U17 422 aa4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 DDIASQ8IXT1 998 aa4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 FAM185AQ8N0U4 392 aa4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 SCML4Q8N228 414 aa4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 C8orf58Q8NAV2 365 aa4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 GABPB2Q8TAK5 448 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 SAT2Q96F10 170 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 RADILQ96JH8 1075 aa4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 SRSF8Q9BRL6 282 aaKnown RBP4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 BPIFA1Q9NP55 256 aa4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 PDGFCQ9NRA1 345 aa4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 SPATS2LQ9NUQ6 558 aaKnown RBP4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 MRPL15Q9P015 296 aaKnown RBP4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 KLHL13Q9P2N7 655 aa4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 NENFQ9UMX5 172 aa4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 LSM4Q9Y4Z0 139 aaKnown RBP4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 MAGED1Q9Y5V3 778 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P31-201ENST00000413333 PASKQ96RG2 1323 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 HSPB2A8KAH6 182 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 A8MZ25 164 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 CTDSP2O14595 271 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 ENTPD3O75355 529 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 NDUFS3O75489 264 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 SLC25A12O75746 678 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 APOA4P06727 396 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 CTPS1P17812 591 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 GABRB1P18505 474 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 IL11P20809 199 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 BMP5P22003 454 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 PROZP22891 400 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 RYKP34925 604 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 PIK3CAP42336 1068 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 NRIP1P48552 1158 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 GALCP54803 685 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 TFF2Q03403 129 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 OLIG2Q13516 323 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 CAPSQ13938 189 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 DRAP1Q14919 205 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 HSPB2Q16082 182 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 TMEM266Q2M3C6 531 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 SLC9C1Q4G0N8 1177 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 TTC39AQ5SRH9 613 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 ISM2Q6H9L7 571 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 MRGPRGQ86SM5 289 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 NOXA1Q86UR1 476 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 TMC8Q8IU68 726 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 CCDC13Q8IYE1 715 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 SLC25A41Q8N5S1 370 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 POC5Q8NA72 575 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 GJC3Q8NFK1 279 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 BCAS4Q8TDM0 211 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 EME1Q96AY2 570 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 RNF183Q96D59 192 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 CLMNQ96JQ2 1002 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 SH2D3AQ9BRG2 576 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 MXRA8Q9BRK3 442 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 IFIH1Q9BYX4 1025 aaKnown RBP4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 TKTL2Q9H0I9 626 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 SIL1Q9H173 461 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 PLEKHA4Q9H4M7 779 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 RANGRFQ9HD47 186 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 ABI3Q9P2A4 366 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 CFDP1Q9UEE9 299 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 FBXL17Q9UF56 701 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 INSL6Q9Y581 213 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 WDR17Q8IZU2 1322 aa4.97□□□□□ -1.61
HMGB3P31-201ENST00000413333 FAM237AA0A1B0GTK4 181 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms