RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 FSTL4Q6MZW2 842 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 CCDC70Q6NSX1 233 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 KDM7AQ6ZMT4 941 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 FUKQ8N0W3 1084 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 DCLK2Q8N568 766 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 SCAMP5Q8TAC9 235 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 Q8TCH9 128 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 SLC2A14Q8TDB8 520 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 TAS1R2Q8TE23 839 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 OSCP1Q8WVF1 389 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 OVCA2Q8WZ82 227 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 CD101Q93033 1021 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 ATP2A3Q93084 1043 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 EEF2KMTQ96G04 330 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 TSG101Q99816 390 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 P2RY13Q9BPV8 354 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 DNAI2Q9GZS0 605 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 EPN3Q9H201 632 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 LINC00597Q9H2U6 94 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 ACTR5Q9H9F9 607 aaPredicted RBP5.5□□□□□ -1.53
LINC00342-201ENST00000412393 BARX1Q9HBU1 254 aaPredicted RBP5.5□□□□□ -1.53
LINC00342-201ENST00000412393 APOBEC3GQ9HC16 384 aaKnown RBP5.5□□□□□ -1.53
LINC00342-201ENST00000412393 FBRSL1Q9HCM7 1045 aaKnown RBP5.5□□□□□ -1.53
LINC00342-201ENST00000412393 TMEM8AQ9HCN3 771 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 BATF3Q9NR55 127 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 FAM49BQ9NUQ9 324 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 ZNHIT6Q9NWK9 470 aaKnown RBP5.5□□□□□ -1.53
LINC00342-201ENST00000412393 COMMD8Q9NX08 183 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 GOLGA6AQ9NYA3 693 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 HMGXB4Q9UGU5 601 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 CHORDC1Q9UHD1 332 aaPredicted RBP5.5□□□□□ -1.53
LINC00342-201ENST00000412393 RAB23Q9ULC3 237 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 REXO2Q9Y3B8 237 aaKnown RBP5.5□□□□□ -1.53
LINC00342-201ENST00000412393 USP34Q70CQ2 3546 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 ABCA7Q8IZY2 2146 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 GVINP1Q7Z2Y8 2422 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 SPTBN4Q9H254 2564 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 FAM92AA1XBS5 289 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 GOLGA6BA6NDN3 693 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 NPIPB8E9PQR5 432 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 K7ESF4 209 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 SLC9A3R1O14745 358 aaPredicted RBP5.49□□□□□ -1.53
LINC00342-201ENST00000412393 PSMA7O14818 248 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 SCAMP3O14828 347 aaKnown RBP5.49□□□□□ -1.53
LINC00342-201ENST00000412393 PPP1R12AO14974 1030 aaPredicted RBP5.49□□□□□ -1.53
LINC00342-201ENST00000412393 COCHO43405 550 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 ATG13O75143 517 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 PAPSS2O95340 614 aaPredicted RBP5.49□□□□□ -1.53
LINC00342-201ENST00000412393 EGFP01133 1207 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 PAEPP09466 180 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 FAM200BP0CF97 657 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 TCP1P17987 556 aaKnown RBP5.49□□□□□ -1.53
LINC00342-201ENST00000412393 PI4KAP42356 2102 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 SLC5A3P53794 718 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 MAP3K7CLP57077 242 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 SLC8A3P57103 927 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 ZXDBP98169 803 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 FKBP3Q00688 224 aaKnown RBP5.49□□□□□ -1.53
LINC00342-201ENST00000412393 ACTN3Q08043 901 aaPredicted RBP5.49□□□□□ -1.53
LINC00342-201ENST00000412393 IFFO1Q0D2I5 559 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 INCA1Q0VD86 236 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 FBXO43Q4G163 708 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 SPDYCQ5MJ68 293 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 HECTD3Q5T447 861 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 TMCO4Q5TGY1 634 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 NAIF1Q69YI7 327 aaPredicted RBP5.49□□□□□ -1.53
LINC00342-201ENST00000412393 WDR59Q6PJI9 974 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 LRIG3Q6UXM1 1119 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 CLEC20AQ6ZU45 233 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 LONP2Q86WA8 852 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 DDX42Q86XP3 938 aaKnown RBP eCLIP5.49□□□□□ -1.53
LINC00342-201ENST00000412393 KIAA2013Q8IYS2 634 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 TTC39CQ8N584 583 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 RNF10Q8N5U6 811 aaKnown RBP5.49□□□□□ -1.53
LINC00342-201ENST00000412393 KIAA1958Q8N8K9 716 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 C12orf29Q8N999 325 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 FBXL13Q8NEE6 735 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 ZMIZ2Q8NF64 920 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 TRIM58Q8NG06 486 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 BCAS4Q8TDM0 211 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 SEMA4DQ92854 862 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 JAKMIP2Q96AA8 810 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 CYFIP2Q96F07 1278 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 TWNKQ96RR1 684 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 HNRNPABQ99729 332 aaKnown RBP5.49□□□□□ -1.53
LINC00342-201ENST00000412393 SMOQ99835 787 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 DESI2Q9BSY9 194 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 SELENOOQ9BVL4 669 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 TSGA10Q9BZW7 698 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 TTYH3Q9C0H2 523 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 FBXO44Q9H4M3 255 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 THAP9Q9H5L6 903 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 SEC61A2Q9H9S3 476 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 CSNK1G1Q9HCP0 422 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 LZTFL1Q9NQ48 299 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 C2orf42Q9NWW7 574 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 RAB20Q9NX57 234 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 IL37Q9NZH6 218 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 CFAP97Q9P2B7 532 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 ADAMTS1Q9UHI8 967 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms