RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 ANKRD20A4Q4UJ75 823 aa11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 LGSNQ5TDP6 509 aa11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 DENND5AQ6IQ26 1287 aa11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 ZNF449Q6P9G9 518 aa11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 KDM7AQ6ZMT4 941 aa11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 CYS1Q717R9 158 aa11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 SLC26A11Q86WA9 606 aa11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 LRRC6Q86X45 466 aa11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 CNPY4Q8N129 248 aa11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 AHI1Q8N157 1196 aa11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 WFIKKN2Q8TEU8 576 aa11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 SLC44A1Q8WWI5 657 aa11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 ATP2A3Q93084 1043 aa11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 CERS2Q96G23 380 aa11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 RANBP9Q96S59 729 aa11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 SELENOSQ9BQE4 189 aa11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 DHRS4Q9BTZ2 278 aa11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 TRPV4Q9HBA0 871 aa11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 ARNT2Q9HBZ2 717 aa11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 ZFP14Q9HCL3 533 aa11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 PPANQ9NQ55 473 aaKnown RBP11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 CLDND1Q9NY35 253 aa11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 SENP1Q9P0U3 644 aa11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 TXNDC16Q9P2K2 825 aa11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 FCF1Q9Y324 198 aaKnown RBP11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 TCAF1Q9Y4C2 921 aa11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 ARIH1Q9Y4X5 557 aaPredicted RBP11.74□□□□□ -0.53
SNRNP35-202ENST00000412157 LOC285095A0A1B0GVY8 99 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 HOXC11O43248 304 aaPredicted RBP11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 ALDH1A2O94788 518 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 CD160O95971 181 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 BMP1P13497 986 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 POLR2EP19388 210 aaKnown RBP11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 GCAP28676 217 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 CHRNA4P43681 627 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 MAPK8P45983 427 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 SERPINB9P50453 376 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 COL4A3Q01955 1670 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 CHD9Q3L8U1 2897 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 TNFAIP8L3Q5GJ75 292 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 SIRPB2Q5JXA9 342 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 PKN3Q6P5Z2 889 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 TRMT10BQ6PF06 316 aaKnown RBP11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 ADGRD1Q6QNK2 874 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 CES3Q6UWW8 571 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 MARK2Q7KZI7 788 aaKnown RBP11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 SRLQ86TD4 932 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 TMEM135Q86UB9 458 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 RNF135Q8IUD6 432 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 YAF2Q8IY57 180 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 ADGRG2Q8IZP9 1017 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 PAF1Q8N7H5 531 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 GABPB2Q8TAK5 448 aaPredicted RBP11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 DCAKDQ8WVC6 231 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 RSPRY1Q96DX4 576 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 LMLNQ96KR4 655 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 TRIM56Q9BRZ2 755 aaKnown RBP11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 KIFC1Q9BW19 673 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 TDRD1Q9BXT4 1180 aaKnown RBP11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 TM6SF2Q9BZW4 377 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 CNOT10Q9H9A5 744 aaKnown RBP11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 PLAC1Q9HBJ0 212 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 NOD2Q9HC29 1040 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 EURLQ9NYK6 297 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 ZFATQ9P243 1243 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 PRKAG3Q9UGI9 489 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 CDH22Q9UJ99 828 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 ZNF180Q9UJW8 692 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 INTS6Q9UL03 887 aaKnown RBP11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 FAM169AQ9Y6X4 670 aa11.73□□□□□ -0.53
SNRNP35-202ENST00000412157 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 TBX10O75333 385 aa11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 GJB3O75712 270 aa11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 KRT37O76014 449 aa11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 KRT38O76015 456 aa11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 ATXN1LP0C7T5 689 aaKnown RBP11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 SRCP12931 536 aa11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 ALADP13716 330 aa11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 NMBRP28336 390 aa11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 NNMTP40261 264 aa11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 DGKGP49619 791 aa11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 SNRPD1P62314 119 aaKnown RBP11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 GALNT3Q14435 633 aa11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 MBLAC2Q68D91 279 aa11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 PDPK2PQ6A1A2 396 aa11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 TRIM68Q6AZZ1 485 aa11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 C22orf39Q6P5X5 142 aa11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 NCEH1Q6PIU2 408 aa11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 NLRP9Q7RTR0 991 aa11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 KCNMB4Q86W47 210 aa11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 SRRM1Q8IYB3 904 aaKnown RBP11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 RYBPQ8N488 228 aaPredicted RBP11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 CPA6Q8N4T0 437 aa11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 NAT16Q8N8M0 369 aa11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 RMDN1Q96DB5 314 aa11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 MFSD3Q96ES6 412 aa11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 ADGRE3Q9BY15 652 aa11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 CEP44Q9C0F1 390 aa11.72□□□□□ -0.53
SNRNP35-202ENST00000412157 CHRAC1Q9NRG0 131 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms