RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 TPD52P55327 224 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-204ENST00000412061 FOXL2P58012 376 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 GPC5P78333 572 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 MRPS5P82675 430 aaKnown RBP4.7□□□□□ -1.66
BRCA1-204ENST00000412061 TLE3Q04726 772 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 SLC14A1Q13336 389 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 ZNF169Q14929 603 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-204ENST00000412061 GSTA3Q16772 222 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 SMU1Q2TAY7 513 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 C2orf76Q3KRA6 126 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 FAM153CQ494X1 144 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 CC2D1BQ5T0F9 858 aaKnown RBP4.7□□□□□ -1.66
BRCA1-204ENST00000412061 ARMC4Q5T2S8 1044 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 TMEM63BQ5T3F8 832 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 MEX3CQ5U5Q3 659 aaKnown RBP4.7□□□□□ -1.66
BRCA1-204ENST00000412061 HECTD2Q5U5R9 776 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 TMEM81Q6P7N7 255 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 SLC46A3Q7Z3Q1 461 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 RHPN2Q8IUC4 686 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 TUSC5Q8IXB3 177 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 DUSP19Q8WTR2 217 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 KCNE4Q8WWG9 221 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 N4BP2L2Q92802 583 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-204ENST00000412061 PGAM5Q96HS1 289 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 C1orf74Q96LT6 269 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 RUNDC3BQ96NL0 473 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 DACH2Q96NX9 599 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 TSGA13Q96PP4 275 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 SNX18Q96RF0 628 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 IWS1Q96ST2 819 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 MAP7D2Q96T17 732 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 SRSF8Q9BRL6 282 aaKnown RBP4.7□□□□□ -1.66
BRCA1-204ENST00000412061 CCDC106Q9BWC9 280 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 THAP9Q9H5L6 903 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 CDCP1Q9H5V8 836 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 FBRSL1Q9HCM7 1045 aaKnown RBP4.7□□□□□ -1.66
BRCA1-204ENST00000412061 TFCP2L1Q9NZI6 479 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 FOXJ2Q9P0K8 574 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 AKAP7Q9P0M2 348 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-204ENST00000412061 SH3BP4Q9P0V3 963 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 UBA2Q9UBT2 640 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-204ENST00000412061 KLQ9UEF7 1012 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 FBXL17Q9UF56 701 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 SEC63Q9UGP8 760 aaKnown RBP4.7□□□□□ -1.66
BRCA1-204ENST00000412061 VPS4AQ9UN37 437 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 ST3GAL5Q9UNP4 418 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 MTMR6Q9Y217 621 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 ATP6V0A2Q9Y487 856 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 A0A1W2PQF6 199 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 ARHGEF37A1IGU5 675 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 A4D1N5 150 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 TMEM191CA6NGB0 347 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 C3orf70A6NLC5 250 aaPredicted RBP4.69□□□□□ -1.66
BRCA1-204ENST00000412061 MPHOSPH10O00566 681 aaKnown RBP4.69□□□□□ -1.66
BRCA1-204ENST00000412061 PRAMEF2O60811 474 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 PAGE4O60829 102 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 PPFIA2O75334 1257 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 TACC1O75410 805 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 STAM2O75886 525 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 SEC31AO94979 1220 aaKnown RBP4.69□□□□□ -1.66
BRCA1-204ENST00000412061 TPOP07202 933 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 TPM2P07951 284 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 ELFN1P0C7U0 828 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 KRT10P13645 584 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 ARSAP15289 507 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 ZNF8P17098 575 aaPredicted RBP4.69□□□□□ -1.66
BRCA1-204ENST00000412061 DRD4P21917 467 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 MAPK3P27361 379 aaPredicted RBP4.69□□□□□ -1.66
BRCA1-204ENST00000412061 DUSP1P28562 367 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 JAK3P52333 1124 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 UBASH3AP57075 661 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 RAE1P78406 368 aaKnown RBP4.69□□□□□ -1.66
BRCA1-204ENST00000412061 CFHR3Q02985 330 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 NIPAL4Q0D2K0 466 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 SNTB1Q13884 538 aaKnown RBP4.69□□□□□ -1.66
BRCA1-204ENST00000412061 RNASE12Q5GAN4 147 aaKnown RBP4.69□□□□□ -1.66
BRCA1-204ENST00000412061 IGFL4Q6B9Z1 124 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 LAIR1Q6GTX8 287 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 NAPEPLDQ6IQ20 393 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 WDR93Q6P2C0 686 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 SLC29A4Q7RTT9 530 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 GRASPQ7Z6J2 395 aaPredicted RBP4.69□□□□□ -1.66
BRCA1-204ENST00000412061 RPAINQ86UA6 219 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 RAB40AQ8WXH6 277 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 LARP4BQ92615 738 aaKnown RBP4.69□□□□□ -1.66
BRCA1-204ENST00000412061 ATP6V0A1Q93050 837 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 ZKSCAN4Q969J2 545 aaPredicted RBP4.69□□□□□ -1.66
BRCA1-204ENST00000412061 TMCO6Q96DC7 493 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 EDC3Q96F86 508 aaKnown RBP4.69□□□□□ -1.66
BRCA1-204ENST00000412061 TRMT61AQ96FX7 289 aaKnown RBP4.69□□□□□ -1.66
BRCA1-204ENST00000412061 FIZ1Q96SL8 496 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 MMS19Q96T76 1030 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 AGAP2Q99490 1192 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 KRTAP9-8Q9BYQ0 159 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 CIPCQ9C0C6 399 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 TNMDQ9H2S6 317 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 SNTG1Q9NSN8 517 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 DDX43Q9NXZ2 648 aaKnown RBP4.69□□□□□ -1.66
BRCA1-204ENST00000412061 HSPB7Q9UBY9 170 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 SH3BGRL2Q9UJC5 107 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms