RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 TBC1D30Q9Y2I9 924 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 A0A087X1B8 175 aa16.03■□□□□ 0.16
HOXD3-202ENST00000410016 NEMP2A6NFY4 417 aa16.03■□□□□ 0.16
HOXD3-202ENST00000410016 SDHDO14521 159 aa16.03■□□□□ 0.16
HOXD3-202ENST00000410016 KPNA6O60684 536 aa16.03■□□□□ 0.16
HOXD3-202ENST00000410016 PAMP19021 973 aa16.03■□□□□ 0.16
HOXD3-202ENST00000410016 CD52P31358 61 aa16.03■□□□□ 0.16
HOXD3-202ENST00000410016 WNT3AP56704 352 aa16.03■□□□□ 0.16
HOXD3-202ENST00000410016 MED21Q13503 144 aa16.03■□□□□ 0.16
HOXD3-202ENST00000410016 MAPRE1Q15691 268 aaKnown RBP16.03■□□□□ 0.16
HOXD3-202ENST00000410016 NOMO2Q5JPE7 1267 aa16.03■□□□□ 0.16
HOXD3-202ENST00000410016 RBM20Q5T481 1227 aaKnown RBP16.03■□□□□ 0.16
HOXD3-202ENST00000410016 NXNQ6DKJ4 435 aa16.03■□□□□ 0.16
HOXD3-202ENST00000410016 BNC2Q6ZN30 1099 aaPredicted RBP16.03■□□□□ 0.16
HOXD3-202ENST00000410016 LRRC49Q8IUZ0 686 aa16.03■□□□□ 0.16
HOXD3-202ENST00000410016 PQLC1Q8N2U9 271 aa16.03■□□□□ 0.16
HOXD3-202ENST00000410016 SGF29Q96ES7 293 aa16.03■□□□□ 0.16
HOXD3-202ENST00000410016 MARK4Q96L34 752 aa16.03■□□□□ 0.16
HOXD3-202ENST00000410016 PRKD2Q9BZL6 878 aa16.03■□□□□ 0.16
HOXD3-202ENST00000410016 FAM192AQ9GZU8 254 aa16.03■□□□□ 0.16
HOXD3-202ENST00000410016 ATP13A1Q9HD20 1204 aa16.03■□□□□ 0.16
HOXD3-202ENST00000410016 SPATS2LQ9NUQ6 558 aaKnown RBP16.03■□□□□ 0.16
HOXD3-202ENST00000410016 IPO11Q9UI26 975 aaKnown RBP16.03■□□□□ 0.16
HOXD3-202ENST00000410016 CPB1P15086 417 aa16.02■□□□□ 0.16
HOXD3-202ENST00000410016 KCNA5P22460 613 aa16.02■□□□□ 0.16
HOXD3-202ENST00000410016 ATP5F1P24539 256 aaPredicted RBP16.02■□□□□ 0.16
HOXD3-202ENST00000410016 MSX2P35548 267 aaPredicted RBP16.02■□□□□ 0.16
HOXD3-202ENST00000410016 NRG1Q02297 640 aaPredicted RBP16.02■□□□□ 0.16
HOXD3-202ENST00000410016 DSC3Q14574 896 aa16.02■□□□□ 0.16
HOXD3-202ENST00000410016 C17orf99Q6UX52 265 aa16.02■□□□□ 0.16
HOXD3-202ENST00000410016 KIAA0408Q6ZU52 694 aa16.02■□□□□ 0.16
HOXD3-202ENST00000410016 SPDYE1Q8NFV5 336 aaPredicted RBP16.02■□□□□ 0.16
HOXD3-202ENST00000410016 OLFM1Q99784 485 aa16.02■□□□□ 0.16
HOXD3-202ENST00000410016 C6orf203Q9P0P8 240 aaPredicted RBP16.02■□□□□ 0.16
HOXD3-202ENST00000410016 INPP5FQ9Y2H2 1132 aa16.02■□□□□ 0.16
HOXD3-202ENST00000410016 WASH4PA8MWX3 477 aa16.02■□□□□ 0.15
HOXD3-202ENST00000410016 HSPA1AP0DMV8 641 aaKnown RBP16.02■□□□□ 0.15
HOXD3-202ENST00000410016 HSPA1BP0DMV9 641 aaKnown RBP16.02■□□□□ 0.15
HOXD3-202ENST00000410016 GRIK1P39086 918 aa16.02■□□□□ 0.15
HOXD3-202ENST00000410016 ALDH1A3P47895 512 aa16.02■□□□□ 0.15
HOXD3-202ENST00000410016 TUSC3Q13454 348 aa16.02■□□□□ 0.15
HOXD3-202ENST00000410016 GRM2Q14416 872 aa16.02■□□□□ 0.15
HOXD3-202ENST00000410016 IHHQ14623 411 aa16.02■□□□□ 0.15
HOXD3-202ENST00000410016 RFTN1Q14699 578 aaPredicted RBP16.02■□□□□ 0.15
HOXD3-202ENST00000410016 SH2D4BQ5SQS7 431 aa16.02■□□□□ 0.15
HOXD3-202ENST00000410016 PELI3Q8N2H9 469 aa16.02■□□□□ 0.15
HOXD3-202ENST00000410016 SUSD3Q96L08 255 aa16.02■□□□□ 0.15
HOXD3-202ENST00000410016 C1orf74Q96LT6 269 aa16.02■□□□□ 0.15
HOXD3-202ENST00000410016 BTBD9Q96Q07 612 aa16.02■□□□□ 0.15
HOXD3-202ENST00000410016 SLC25A51Q9H1U9 297 aa16.02■□□□□ 0.15
HOXD3-202ENST00000410016 POMKQ9H5K3 350 aa16.02■□□□□ 0.15
HOXD3-202ENST00000410016 EFCAB1Q9HAE3 211 aa16.02■□□□□ 0.15
HOXD3-202ENST00000410016 PAPOLBQ9NRJ5 636 aaKnown RBP16.02■□□□□ 0.15
HOXD3-202ENST00000410016 TRPM7Q96QT4 1865 aa16.02■□□□□ 0.15
HOXD3-202ENST00000410016 SCN10AQ9Y5Y9 1956 aa16.02■□□□□ 0.15
HOXD3-202ENST00000410016 TTC3P53804 2025 aa16.02■□□□□ 0.15
HOXD3-202ENST00000410016 STX16-NPEPL1H3BU86 382 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 SNUPNO95149 360 aaKnown RBP16.01■□□□□ 0.15
HOXD3-202ENST00000410016 MOCS2O96007 188 aaPredicted RBP16.01■□□□□ 0.15
HOXD3-202ENST00000410016 HNRNPLP14866 589 aaKnown RBP eCLIP16.01■□□□□ 0.15
HOXD3-202ENST00000410016 LEPRP48357 1165 aaKnown RBP16.01■□□□□ 0.15
HOXD3-202ENST00000410016 PKNOX1P55347 436 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 RPL26P61254 145 aaKnown RBP16.01■□□□□ 0.15
HOXD3-202ENST00000410016 SULT2A1Q06520 285 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 SEPT6Q14141 434 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 CSHL1Q14406 222 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 TECRLQ5HYJ1 363 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 MAP3K21Q5TCX8 1036 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 PIK3R6Q5UE93 754 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 THEM5Q8N1Q8 247 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 PNPLA1Q8N8W4 532 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 CEP70Q8NHQ1 597 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 NDNQ99608 321 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 WDR41Q9HAD4 459 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 TNFRSF12AQ9NP84 129 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 TBC1D13Q9NVG8 400 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 A0A1W2PQH9 124 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 TRPC5OSA6NMA1 111 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 TSPY1Q01534 308 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 FLOT2Q14254 428 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 TAF1CQ15572 869 aaPredicted RBP16.01■□□□□ 0.15
HOXD3-202ENST00000410016 SLC14A2Q15849 920 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 PCSK7Q16549 785 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 MMEL1Q495T6 779 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 FBXL19Q6PCT2 694 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 CHSY3Q70JA7 882 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 SPATA2LQ8IUW3 424 aaPredicted RBP16.01■□□□□ 0.15
HOXD3-202ENST00000410016 ZNF683Q8IZ20 524 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 OR13J1Q8NGT2 312 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 SPPL2BQ8TCT7 592 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 IMP4Q96G21 291 aaKnown RBP16.01■□□□□ 0.15
HOXD3-202ENST00000410016 UBXN10Q96LJ8 280 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 MYLKQ15746 1914 aa16.01■□□□□ 0.15
HOXD3-202ENST00000410016 NYNRINQ9P2P1 1898 aaKnown RBP16.01■□□□□ 0.15
HOXD3-202ENST00000410016 EME2A4GXA9 379 aaPredicted RBP16■□□□□ 0.15
HOXD3-202ENST00000410016 CAPN8A6NHC0 703 aa16■□□□□ 0.15
HOXD3-202ENST00000410016 ACOT8O14734 319 aa16■□□□□ 0.15
HOXD3-202ENST00000410016 CFLARO15519 480 aa16■□□□□ 0.15
HOXD3-202ENST00000410016 ENO3P13929 434 aaPredicted RBP16■□□□□ 0.15
HOXD3-202ENST00000410016 RAB27AP51159 221 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms