RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 USP1O94782 785 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 INHBAP08476 426 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 SRCP12931 536 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 KRT15P19012 456 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 PRKCHP24723 683 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 DGKGP49619 791 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 CTC1Q2NKJ3 1217 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 DGKKQ5KSL6 1271 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 SPANXN3Q5MJ09 141 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 TMEM215Q68D42 235 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 MBLAC2Q68D91 279 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 PKN3Q6P5Z2 889 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 PARM1Q6UWI2 310 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 ADIPOR2Q86V24 386 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 YAF2Q8IY57 180 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 SRRM1Q8IYB3 904 aaKnown RBP12.57□□□□□ -0.4
CHMP3-204ENST00000409727 PAF1Q8N7H5 531 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 LPCAT1Q8NF37 534 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 BLOC1S5Q8TDH9 187 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 DCAKDQ8WVC6 231 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 ATP2A3Q93084 1043 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 RMDN1Q96DB5 314 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 FEM1CQ96JP0 617 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 SMIM14Q96QK8 99 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 CIPCQ9C0C6 399 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 STMN4Q9H169 189 aaPredicted RBP12.57□□□□□ -0.4
CHMP3-204ENST00000409727 MOCS1Q9NZB8 636 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 SLC2A6Q9UGQ3 507 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 EVLQ9UI08 416 aaPredicted RBP12.57□□□□□ -0.4
CHMP3-204ENST00000409727 SLC24A2Q9UI40 661 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 SLC25A13Q9UJS0 675 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 ZCWPW2A0A1B0GU75 182 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 MAGEB16A2A368 324 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 H3BQ06 376 aaPredicted RBP12.57□□□□□ -0.4
CHMP3-204ENST00000409727 NFATC1O95644 943 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 SLC4A1P02730 911 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 C1QAP02745 245 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 PDHA1P08559 390 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 BMP1P13497 986 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 POLR2EP19388 210 aaKnown RBP12.57□□□□□ -0.4
CHMP3-204ENST00000409727 SLC6A11P48066 632 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 ECT2LQ008S8 904 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 TRAF2Q12933 501 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 NCEH1Q6PIU2 408 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 MICALCLQ6ZW33 695 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 SRLQ86TD4 932 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 TMEM135Q86UB9 458 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 LRRC6Q86X45 466 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 FGF14Q92915 247 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 CERS2Q96G23 380 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 SELENOSQ9BQE4 189 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 KIFC1Q9BW19 673 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 TDRD1Q9BXT4 1180 aaKnown RBP12.57□□□□□ -0.4
CHMP3-204ENST00000409727 ECT2Q9H8V3 914 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 TRPV4Q9HBA0 871 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 ARNT2Q9HBZ2 717 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 C20orf96Q9NUD7 363 aaPredicted RBP12.57□□□□□ -0.4
CHMP3-204ENST00000409727 EURLQ9NYK6 297 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 GTSE1Q9NYZ3 720 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 LGALS13Q9UHV8 139 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 SLCO3A1Q9UIG8 710 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 TCAF1Q9Y4C2 921 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 MYLKQ15746 1914 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 FAM159BA6NKW6 160 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 SOX1O00570 391 aaPredicted RBP12.56□□□□□ -0.4
CHMP3-204ENST00000409727 BUD23O43709 281 aaKnown RBP12.56□□□□□ -0.4
CHMP3-204ENST00000409727 TULP3O75386 442 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 ALDH1A2O94788 518 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 PIGNO95427 931 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 NDST3O95803 873 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 LAMP2P13473 410 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 CREB1P16220 341 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 HLA-DPA1P20036 260 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 ATP5DP30049 168 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 RGS19P49795 217 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 KDSRQ06136 332 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 NSUN2Q08J23 767 aaKnown RBP eCLIP12.56□□□□□ -0.4
CHMP3-204ENST00000409727 MESP2Q0VG99 397 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 HSP90AA5PQ58FG0 334 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 NAIF1Q69YI7 327 aaPredicted RBP12.56□□□□□ -0.4
CHMP3-204ENST00000409727 ESRP1Q6NXG1 681 aaKnown RBP12.56□□□□□ -0.4
CHMP3-204ENST00000409727 ADGRD1Q6QNK2 874 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 EXOC3L1Q86VI1 746 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 TDRPQ86YL5 185 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 CAMK1DQ8IU85 385 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 AHI1Q8N157 1196 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 RIBC1Q8N443 379 aaPredicted RBP12.56□□□□□ -0.4
CHMP3-204ENST00000409727 ZNF557Q8N988 423 aaPredicted RBP12.56□□□□□ -0.4
CHMP3-204ENST00000409727 SLC44A1Q8WWI5 657 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 TRIB3Q96RU7 358 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 AGAP2Q99490 1192 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 FAM83CQ9BQN1 747 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 DHRS4Q9BTZ2 278 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 RPP25Q9BUL9 199 aaKnown RBP12.56□□□□□ -0.4
CHMP3-204ENST00000409727 HPS4Q9NQG7 708 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 ZFATQ9P243 1243 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 KCTD3Q9Y597 815 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 FAM169AQ9Y6X4 670 aa12.56□□□□□ -0.4
CHMP3-204ENST00000409727 A0A1W2PPM1 405 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 CCL22O00626 93 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms