RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 CHSY1Q86X52 802 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 IQCKQ8N0W5 287 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 ZNF248Q8NDW4 579 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 OR4C6Q8NH72 309 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 ALG14Q96F25 216 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 KLHDC7BQ96G42 594 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 HSFY1Q96LI6 401 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 SERPINB11Q96P15 392 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 PRMT1Q99873 361 aaKnown RBP12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 GOLGA6AQ9NYA3 693 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 PCDHB4Q9Y5E5 795 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 U3KQA8 63 aa12.97□□□□□ -0.33
CHRNA1-205ENST00000409542 COL6A6A6NMZ7 2263 aa12.96□□□□□ -0.33
CHRNA1-205ENST00000409542 MAST4O15021 2626 aa12.96□□□□□ -0.33
CHRNA1-205ENST00000409542 MYO18BQ8IUG5 2567 aa12.96□□□□□ -0.33
CHRNA1-205ENST00000409542 A0A1W2PNU3 283 aaPredicted RBP12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 ESYT3A0FGR9 886 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 CYP1A2P05177 515 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 IVLP07476 585 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 PAEPP09466 180 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 FAM153BP0C7A2 387 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 RPL34P49207 117 aaKnown RBP12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 IRAK1P51617 712 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 YWHAEP62258 255 aaKnown RBP12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 GABREP78334 506 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 DAB2P98082 770 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 CDR2Q01850 454 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 GCNT1Q02742 428 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 ZSCAN26Q16670 478 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 FAM153CQ494X1 144 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 CXorf57Q6NSI4 855 aaKnown RBP12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 LRIG3Q6UXM1 1119 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 PPM1KQ8N3J5 372 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 UBL4BQ8N7F7 174 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 TMEM145Q8NBT3 493 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 TTC9Q92623 222 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 FAM149B1Q96BN6 582 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 ZIM3Q96PE6 472 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 PCDHB18PQ96TA0 734 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 AP1M1Q9BXS5 423 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 OSBPL2Q9H1P3 480 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 KDM4CQ9H3R0 1056 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 FZD3Q9NPG1 666 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 CWC15Q9P013 229 aaKnown RBP12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 CTTNBP2NLQ9P2B4 639 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 FAM153AQ9UHL3 310 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 PPM1HQ9ULR3 514 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 TPX2Q9ULW0 747 aaKnown RBP12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 DMTF1Q9Y222 760 aa12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 COL27A1Q8IZC6 1860 aaPredicted RBP12.96□□□□□ -0.34
CHRNA1-205ENST00000409542 GOLGA6L10A0A0M3HER8 536 aa12.95□□□□□ -0.34
CHRNA1-205ENST00000409542 FAM187AA6NFU0 413 aa12.95□□□□□ -0.34
CHRNA1-205ENST00000409542 PRAMEF26H0Y7S4 382 aa12.95□□□□□ -0.34
CHRNA1-205ENST00000409542 SLC31A1O15431 190 aa12.95□□□□□ -0.34
CHRNA1-205ENST00000409542 RNGTTO60942 597 aaKnown RBP12.95□□□□□ -0.34
CHRNA1-205ENST00000409542 USP12O75317 370 aa12.95□□□□□ -0.34
CHRNA1-205ENST00000409542 FBXO21O94952 628 aa12.95□□□□□ -0.34
CHRNA1-205ENST00000409542 IGLV3-25P01717 112 aa12.95□□□□□ -0.34
CHRNA1-205ENST00000409542 CTSLP07711 333 aa12.95□□□□□ -0.34
CHRNA1-205ENST00000409542 THEGLP0DJG4 465 aa12.95□□□□□ -0.34
CHRNA1-205ENST00000409542 ECHS1P30084 290 aa12.95□□□□□ -0.34
CHRNA1-205ENST00000409542 GPD2P43304 727 aa12.95□□□□□ -0.34
CHRNA1-205ENST00000409542 HNRNPH2P55795 449 aaKnown RBP12.95□□□□□ -0.34
CHRNA1-205ENST00000409542 PCBP4P57723 403 aaKnown RBP12.95□□□□□ -0.34
CHRNA1-205ENST00000409542 FMO1Q01740 532 aa12.95□□□□□ -0.34
CHRNA1-205ENST00000409542 OVGP1Q12889 678 aa12.95□□□□□ -0.34
CHRNA1-205ENST00000409542 EIF4EBP2Q13542 120 aaPredicted RBP12.95□□□□□ -0.34
CHRNA1-205ENST00000409542 ZNF542PQ5EBM4 170 aa12.95□□□□□ -0.34
CHRNA1-205ENST00000409542 CCDC117Q8IWD4 279 aaPredicted RBP12.95□□□□□ -0.34
CHRNA1-205ENST00000409542 OR13H1Q8NG92 308 aa12.95□□□□□ -0.34
CHRNA1-205ENST00000409542 LRRC45Q96CN5 670 aa12.95□□□□□ -0.34
CHRNA1-205ENST00000409542 PKNOX2Q96KN3 472 aa12.95□□□□□ -0.34
CHRNA1-205ENST00000409542 ZNF578Q96N58 590 aaPredicted RBP12.95□□□□□ -0.34
CHRNA1-205ENST00000409542 DDX47Q9H0S4 455 aaKnown RBP12.95□□□□□ -0.34
CHRNA1-205ENST00000409542 ASCL3Q9NQ33 180 aa12.95□□□□□ -0.34
CHRNA1-205ENST00000409542 FAM114A2Q9NRY5 505 aa12.95□□□□□ -0.34
CHRNA1-205ENST00000409542 A6NNZ2 444 aa12.94□□□□□ -0.34
CHRNA1-205ENST00000409542 CASC3O15234 703 aaKnown RBP12.94□□□□□ -0.34
CHRNA1-205ENST00000409542 KLK10O43240 276 aa12.94□□□□□ -0.34
CHRNA1-205ENST00000409542 SLC7A4O43246 635 aa12.94□□□□□ -0.34
CHRNA1-205ENST00000409542 ATP9BO43861 1147 aa12.94□□□□□ -0.34
CHRNA1-205ENST00000409542 MAGEC1O60732 1142 aa12.94□□□□□ -0.34
CHRNA1-205ENST00000409542 CSO75390 466 aaKnown RBP12.94□□□□□ -0.34
CHRNA1-205ENST00000409542 FGGP02679 453 aa12.94□□□□□ -0.34
CHRNA1-205ENST00000409542 CKMT1AP12532 417 aa12.94□□□□□ -0.34
CHRNA1-205ENST00000409542 CYP11B1P15538 503 aa12.94□□□□□ -0.34
CHRNA1-205ENST00000409542 TBXAS1P24557 533 aaPredicted RBP12.94□□□□□ -0.34
CHRNA1-205ENST00000409542 CTNNA2P26232 953 aa12.94□□□□□ -0.34
CHRNA1-205ENST00000409542 NNMTP40261 264 aa12.94□□□□□ -0.34
CHRNA1-205ENST00000409542 USP8P40818 1118 aa12.94□□□□□ -0.34
CHRNA1-205ENST00000409542 PLK1P53350 603 aa12.94□□□□□ -0.34
CHRNA1-205ENST00000409542 TMPRSS3P57727 454 aa12.94□□□□□ -0.34
CHRNA1-205ENST00000409542 CLDN2P57739 230 aa12.94□□□□□ -0.34
CHRNA1-205ENST00000409542 SKOR1P84550 965 aa12.94□□□□□ -0.34
CHRNA1-205ENST00000409542 RHDQ02161 417 aa12.94□□□□□ -0.34
CHRNA1-205ENST00000409542 CENPCQ03188 943 aa12.94□□□□□ -0.34
CHRNA1-205ENST00000409542 TAF5Q15542 800 aa12.94□□□□□ -0.34
CHRNA1-205ENST00000409542 DLG2Q15700 870 aa12.94□□□□□ -0.34
CHRNA1-205ENST00000409542 TUBB8Q3ZCM7 444 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms