RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 FBRSQ9HAH7 460 aa16.71■□□□□ 0.27
TSPAN4-208ENST00000409531 CD248Q9HCU0 757 aa16.71■□□□□ 0.27
TSPAN4-208ENST00000409531 SCUBE2Q9NQ36 999 aa16.71■□□□□ 0.27
TSPAN4-208ENST00000409531 GOLGA6AQ9NYA3 693 aa16.71■□□□□ 0.27
TSPAN4-208ENST00000409531 BCCIPQ9P287 314 aaKnown RBP eCLIP16.71■□□□□ 0.27
TSPAN4-208ENST00000409531 SPTBN4Q9H254 2564 aa16.71■□□□□ 0.27
TSPAN4-208ENST00000409531 OTOGLQ3ZCN5 2332 aa16.71■□□□□ 0.27
TSPAN4-208ENST00000409531 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 MUSKO15146 869 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 INSIG1O15503 277 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 TTI1O43156 1089 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 BNIP3LO60238 219 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 ANXA9O76027 345 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 SLU7O95391 586 aaKnown RBP16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 HLA-EP13747 358 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 GABRG2P18507 467 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 NFKB1P19838 968 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 CR2P20023 1033 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 RPL22P35268 128 aaKnown RBP16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 ELAVL3Q14576 367 aaKnown RBP16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 SLC14A2Q15849 920 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 LPAL2Q16609 132 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 MYLK3Q32MK0 819 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 LAIR1Q6GTX8 287 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 DSG4Q86SJ6 1040 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 OR2A12Q8NGT7 310 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 OR8D1Q8WZ84 308 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 LRIG1Q96JA1 1093 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 ZC3H10Q96K80 434 aaKnown RBP16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 TUBGCP5Q96RT8 1024 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 RAB17Q9H0T7 212 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 RRAGDQ9NQL2 400 aaPredicted RBP16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 VPS45Q9NRW7 570 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 ASIC3Q9UHC3 531 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 AAR2Q9Y312 384 aaKnown RBP16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 UTP11Q9Y3A2 253 aaKnown RBP16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 NEU2Q9Y3R4 380 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 NDC80O14777 642 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 PSMD3O43242 534 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 RAD51CO43502 376 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 ZSCAN5DPP0CG00 497 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 ETS1P14921 441 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 CA4P22748 312 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 PSMB4P28070 264 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 CD68P34810 354 aaPredicted RBP16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 RGRP47804 291 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 CCNHP51946 323 aaPredicted RBP16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 GEMP55040 296 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 GPS1Q13098 491 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 CAMK2GQ13555 558 aaPredicted RBP16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 TRIP13Q15645 432 aaPredicted RBP16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 ATXN7L2Q5T6C5 722 aaPredicted RBP16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 C9orf64Q5T6V5 341 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 DPY19L3Q6ZPD9 716 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 C11orf74Q86VG3 221 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 ZNF366Q8N895 744 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 GLIS1Q8NBF1 620 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 IMP4Q96G21 291 aaKnown RBP16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 HEPHQ9BQS7 1158 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 CPEB1Q9BZB8 566 aaKnown RBP16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 ATP13A3Q9H7F0 1226 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 NCDNQ9UBB6 729 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 INVSQ9Y283 1065 aa16.7■□□□□ 0.26
TSPAN4-208ENST00000409531 SDK1Q7Z5N4 2213 aa16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 ERI2A8K979 691 aaKnown RBP16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 E7EVH7 732 aa16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 RNASEH1O60930 286 aaKnown RBP16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 SIN3BO75182 1162 aa16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 PRNPP04156 253 aa16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 RETP07949 1114 aa16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 ADCY8P40145 1251 aa16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 P2RY2P41231 377 aa16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 TNNT3P45378 269 aaPredicted RBP16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 BASP1P80723 227 aaKnown RBP16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 DSC2Q02487 901 aa16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 BCL2L1Q07817 233 aa16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 MPP3Q13368 585 aa16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 PLK5Q496M5 336 aa16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 NCEH1Q6PIU2 408 aa16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 KBTBD6Q86V97 674 aa16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 DCLK2Q8N568 766 aa16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 FAM160A2Q8N612 972 aaPredicted RBP16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 NOA1Q8NC60 698 aaKnown RBP16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 ARRDC2Q8TBH0 407 aa16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 LOXL4Q96JB6 756 aa16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 MRGPRX1Q96LB2 322 aa16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 HINFPQ9BQA5 517 aa16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 OSBPL1AQ9BXW6 950 aa16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 ZDHHC6Q9H6R6 413 aa16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 NOD2Q9HC29 1040 aa16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 PRSS16Q9NQE7 514 aa16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 RAB6BQ9NRW1 208 aa16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 IL36AQ9UHA7 158 aa16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 FAM153AQ9UHL3 310 aa16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 EVLQ9UI08 416 aaPredicted RBP16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 GMEB2Q9UKD1 530 aa16.69■□□□□ 0.26
TSPAN4-208ENST00000409531 WDR87Q6ZQQ6 2873 aa16.68■□□□□ 0.26
TSPAN4-208ENST00000409531 EFCAB8A8MWE9 144 aa16.68■□□□□ 0.26
TSPAN4-208ENST00000409531 SOCS5O75159 536 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms