RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 CFAP47Q6ZTR5 3102 aa8.47□□□□□ -1.05
GPC3-203ENST00000406757 CHD5Q8TDI0 1954 aa8.46□□□□□ -1.05
GPC3-203ENST00000406757 LAMA1P25391 3075 aa8.46□□□□□ -1.05
GPC3-203ENST00000406757 A0A0A0MRY4 1105 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 CFAP69A5D8W1 941 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 FAM187AA6NFU0 413 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 EFCAB8A8MWE9 144 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.46□□□□□ -1.06
GPC3-203ENST00000406757 ZNF821O75541 412 aaPredicted RBP8.46□□□□□ -1.06
GPC3-203ENST00000406757 GCATO75600 419 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 STK10O94804 968 aaKnown RBP8.46□□□□□ -1.06
GPC3-203ENST00000406757 GAS8O95995 478 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 MT-CYBP00156 380 aaPredicted RBP8.46□□□□□ -1.06
GPC3-203ENST00000406757 ATP5BP06576 529 aaKnown RBP8.46□□□□□ -1.06
GPC3-203ENST00000406757 DLDP09622 509 aaKnown RBP8.46□□□□□ -1.06
GPC3-203ENST00000406757 CD86P42081 329 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 RPL21P46778 160 aaKnown RBP8.46□□□□□ -1.06
GPC3-203ENST00000406757 SERPINH1P50454 418 aaKnown RBP8.46□□□□□ -1.06
GPC3-203ENST00000406757 SCNN1BP51168 640 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 RENBPP51606 427 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 RHOAP61586 193 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 BASP1P80723 227 aaKnown RBP8.46□□□□□ -1.06
GPC3-203ENST00000406757 KCNC4Q03721 635 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 MTM1Q13496 603 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 PTK6Q13882 451 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 HNRNPDQ14103 355 aaKnown RBP8.46□□□□□ -1.06
GPC3-203ENST00000406757 DHX34Q14147 1143 aaKnown RBP8.46□□□□□ -1.06
GPC3-203ENST00000406757 DMC1Q14565 340 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 ZNF234Q14588 700 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 PCSK7Q16549 785 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 P3H1Q32P28 736 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 AASDHQ4L235 1098 aaPredicted RBP8.46□□□□□ -1.06
GPC3-203ENST00000406757 FNDC3BQ53EP0 1204 aaKnown RBP8.46□□□□□ -1.06
GPC3-203ENST00000406757 TMCO4Q5TGY1 634 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 ANKRD22Q5VYY1 191 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 MAATS1Q7Z4T9 603 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 LRRC49Q8IUZ0 686 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 SYNPOQ8N3V7 929 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 SH2D3CQ8N5H7 860 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 CHST14Q8NCH0 376 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 CASKIN2Q8WXE0 1202 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 IFT81Q8WYA0 676 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 ACDQ96AP0 544 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 MYO19Q96H55 970 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 PWWP2AQ96N64 755 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 SPATA13Q96N96 652 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 RBM15Q96T37 977 aaKnown RBP eCLIP8.46□□□□□ -1.06
GPC3-203ENST00000406757 SEMA3CQ99985 751 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 GORASP1Q9BQQ3 440 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 MLPHQ9BV36 600 aaPredicted RBP8.46□□□□□ -1.06
GPC3-203ENST00000406757 PCDH9Q9HC56 1237 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 EPB41L5Q9HCM4 733 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 RAB6BQ9NRW1 208 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 RXFP3Q9NSD7 469 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 CACNA2D2Q9NY47 1150 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 SEPT3Q9UH03 358 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 FEZ2Q9UHY8 353 aaPredicted RBP8.46□□□□□ -1.06
GPC3-203ENST00000406757 EVLQ9UI08 416 aaPredicted RBP8.46□□□□□ -1.06
GPC3-203ENST00000406757 PLA2G4CQ9UP65 541 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 ATP8A1Q9Y2Q0 1164 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 F5P12259 2224 aa8.46□□□□□ -1.06
GPC3-203ENST00000406757 ATG2BQ96BY7 2078 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 KMT2BQ9UMN6 2715 aaPredicted RBP8.45□□□□□ -1.06
GPC3-203ENST00000406757 GOLGA8MH3BSY2 632 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 MTSS1O43312 755 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 USP12O75317 370 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 PMPCBO75439 489 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 RPP40O75818 363 aaKnown RBP8.45□□□□□ -1.06
GPC3-203ENST00000406757 MMP2P08253 660 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 PRKCHP24723 683 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 IVDP26440 423 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 HOXA6P31267 233 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 ACTN2P35609 894 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 EIF2DP41214 584 aaKnown RBP8.45□□□□□ -1.06
GPC3-203ENST00000406757 IL12RB1P42701 662 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 ST8SIA6P61647 398 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 SULT2A1Q06520 285 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 ZNF33AQ06730 810 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 PARP6Q2NL67 630 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 POM121L1PQ3SYA9 428 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 TMEM196Q5HYL7 178 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 IZUMO3Q5VZ72 239 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 C22orf39Q6P5X5 142 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 Q6ZVU0 165 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 SRLQ86TD4 932 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 PRPF39Q86UA1 669 aaKnown RBP8.45□□□□□ -1.06
GPC3-203ENST00000406757 KBTBD6Q86V97 674 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 GSPT2Q8IYD1 628 aaKnown RBP8.45□□□□□ -1.06
GPC3-203ENST00000406757 ZNF557Q8N988 423 aaPredicted RBP8.45□□□□□ -1.06
GPC3-203ENST00000406757 ARRDC2Q8TBH0 407 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 GAB3Q8WWW8 586 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 UBXN4Q92575 508 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 SLCO2A1Q92959 643 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 RTP4Q96DX8 246 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 OXNAD1Q96HP4 312 aaPredicted RBP8.45□□□□□ -1.06
GPC3-203ENST00000406757 RUNDC3BQ96NL0 473 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 ZNF599Q96NL3 588 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 APOL2Q9BQE5 337 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 FERMT1Q9BQL6 677 aa8.45□□□□□ -1.06
GPC3-203ENST00000406757 ERP44Q9BS26 406 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms