RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 CLK4Q9HAZ1 481 aaKnown RBP8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 I3L521 148 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 GABBR2O75899 941 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 C9P02748 559 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 TAS2R41P59536 307 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 PRKCDQ05655 676 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 MFSD7Q6UXD7 560 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 ADGRG6Q86SQ4 1221 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 NINJ1Q92982 152 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 TMEM203Q969S6 136 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 HEMGNQ9BXL5 484 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 PPA2Q9H2U2 334 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 AAASQ9NRG9 546 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 KIAA1107Q9UPP5 1409 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 EEF2KO00418 725 aaKnown RBP8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 PRRG1O14668 218 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 INPPL1O15357 1258 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 MICAL2O94851 1124 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 ADH6P28332 368 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 SERPINF1P36955 418 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 DEFA6Q01524 100 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 PERM1Q5SV97 790 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 TRAPPC3LQ5T215 181 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 MOAP1Q96BY2 351 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 C12orf43Q96C57 262 aaKnown RBP8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 DIRAS2Q96HU8 199 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 PCDHGC3Q9UN70 934 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 GCATO75600 419 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 PPIBP23284 216 aaKnown RBP8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 ZNF45Q02386 682 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 CENPCQ03188 943 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 DDB1Q16531 1140 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 POLE4Q9NR33 117 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 MAB21L2Q9Y586 359 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 PCDHGA8Q9Y5G5 932 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 KDM5AP29375 1690 aaKnown RBP8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 SOX11P35716 441 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 RPL5P46777 297 aaKnown RBP8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 RAB31Q13636 194 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 ZNF549Q6P9A3 640 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 CHST4Q8NCG5 386 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 NCOA5Q9HCD5 579 aaKnown RBP8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 CFL2Q9Y281 166 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 RIIAD1A6NNX1 92 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 RTN2O75298 545 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 NR2C1P13056 603 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 HOXD10P28358 340 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 RASA2Q15283 850 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 MAPK14Q16539 360 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 TMEM44Q2T9K0 475 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 TNS4Q8IZW8 715 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 PTCD3Q96EY7 689 aaKnown RBP8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 TMEM45AQ9NWC5 275 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 TRAF6Q9Y4K3 522 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 PMF1-BGLAPU3KQ54 211 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 PRKD3O94806 890 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 CYP1A1P04798 512 aaPredicted RBP8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 OXCT1P55809 520 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 DEFB107AQ8IZN7 70 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 ZNF527Q8NB42 609 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 CDC6Q99741 560 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 A1CFQ9NQ94 594 aaKnown RBP8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 TRNAU1APQ9NX07 287 aaKnown RBP8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 GPRC5BQ9NZH0 403 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 HOXB8P17481 243 aaPredicted RBP8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 FMO5P49326 533 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 SULT1E1P49888 294 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 RAB4BP61018 213 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 NCS1P62166 190 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 HERC2P3Q9BVR0 1158 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 ICKQ9UPZ9 632 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 GTPBP1O00178 669 aaKnown RBP8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 PITPNM1O00562 1244 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 DCLK1O15075 740 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 PAPSS2O95340 614 aaPredicted RBP8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 PCSK2P16519 638 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 TCEA1P23193 301 aaKnown RBP8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 TTLL4Q14679 1199 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 RRP1BQ14684 758 aaKnown RBP8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 ATAD1Q8NBU5 361 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 SEPHS2Q99611 448 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 PLEKHA3Q9HB20 300 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 OGDHLQ9ULD0 1010 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 PHF24Q9UPV7 400 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 ITSN2Q9NZM3 1697 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 LGALS16A8MUM7 142 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 FADS1O60427 444 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 ZNF367Q7RTV3 350 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 FNDC5Q8NAU1 212 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 KLF6Q99612 283 aaPredicted RBP8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 TRPS1Q9UHF7 1281 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 TSPAN15O95858 294 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 HRGP04196 525 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 PGAM2P15259 253 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 CDK9P50750 372 aaKnown RBP8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 PHC1P78364 1004 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 FGL1Q08830 312 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 CNOT9Q92600 299 aaKnown RBP8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 SLC25A23Q9BV35 468 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 SDK1Q7Z5N4 2213 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms