RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 KCNT2Q6UVM3 1135 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 KIAA1324Q6UXG2 1013 aaKnown RBP11.71□□□□□ -0.53
HLCS-202ENST00000399120 JAZF1Q86VZ6 243 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 RASAL3Q86YV0 1011 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 CD101Q93033 1021 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 RNF31Q96EP0 1072 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 ETAA1Q9NY74 926 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 MRTO4Q9UKD2 239 aaKnown RBP11.71□□□□□ -0.53
HLCS-202ENST00000399120 TFPIP10646 304 aa11.71□□□□□ -0.54
HLCS-202ENST00000399120 HNF4AP41235 474 aa11.71□□□□□ -0.54
HLCS-202ENST00000399120 CDK9P50750 372 aaKnown RBP11.71□□□□□ -0.54
HLCS-202ENST00000399120 RPL38P63173 70 aaKnown RBP11.71□□□□□ -0.54
HLCS-202ENST00000399120 PCID2Q5JVF3 399 aa11.71□□□□□ -0.54
HLCS-202ENST00000399120 GPR107Q5VW38 600 aa11.71□□□□□ -0.54
HLCS-202ENST00000399120 NEPROQ6NW34 567 aa11.71□□□□□ -0.54
HLCS-202ENST00000399120 GALNTL5Q7Z4T8 443 aa11.71□□□□□ -0.54
HLCS-202ENST00000399120 PARGQ86W56 976 aa11.71□□□□□ -0.54
HLCS-202ENST00000399120 PTGR2Q8N8N7 351 aaPredicted RBP11.71□□□□□ -0.54
HLCS-202ENST00000399120 EURLQ9NYK6 297 aa11.71□□□□□ -0.54
HLCS-202ENST00000399120 SAMD9Q5K651 1589 aa11.71□□□□□ -0.54
HLCS-202ENST00000399120 C9P02748 559 aa11.71□□□□□ -0.54
HLCS-202ENST00000399120 NR1H2P55055 460 aa11.71□□□□□ -0.54
HLCS-202ENST00000399120 BNIP2Q12982 314 aa11.71□□□□□ -0.54
HLCS-202ENST00000399120 ZNF720Q7Z2F6 126 aa11.71□□□□□ -0.54
HLCS-202ENST00000399120 TATDN2Q93075 761 aa11.71□□□□□ -0.54
HLCS-202ENST00000399120 DGCR14Q96DF8 476 aaKnown RBP11.71□□□□□ -0.54
HLCS-202ENST00000399120 KCNS3Q9BQ31 491 aa11.71□□□□□ -0.54
HLCS-202ENST00000399120 C1QTNF3-AMACRE9PGA6 284 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 TRIM38O00635 465 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 DBIP07108 87 aaKnown RBP11.7□□□□□ -0.54
HLCS-202ENST00000399120 ALOX5P09917 674 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 CDH3P22223 829 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 RNF19BQ6ZMZ0 732 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 CCDC80Q76M96 950 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 MCEMP1Q8IX19 187 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 PARP8Q8N3A8 854 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 PIK3C3Q8NEB9 887 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 OR4A15Q8NGL6 344 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 B3GALT6Q96L58 329 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 WDR12Q9GZL7 423 aaKnown RBP11.7□□□□□ -0.54
HLCS-202ENST00000399120 RGSL1A5PLK6 1076 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 MAGEC1O60732 1142 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 SLC6A3Q01959 620 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 RUNDC3AQ59EK9 446 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 ANXA8L1Q5VT79 327 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 LLGL2Q6P1M3 1020 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 FOXR1Q6PIV2 292 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 SAMD7Q7Z3H4 446 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 SCUBE3Q8IX30 993 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 OR2L5Q8NG80 312 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 ZKSCAN4Q969J2 545 aaPredicted RBP11.7□□□□□ -0.54
HLCS-202ENST00000399120 SLC47A1Q96FL8 570 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 PXMP2Q9NR77 195 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 SORCS3Q9UPU3 1222 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 PCDHA11Q9Y5I1 949 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 ASTN2O75129 1339 aaPredicted RBP11.7□□□□□ -0.54
HLCS-202ENST00000399120 ISM1B1AKI9 464 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 UBE2Q2LH0YL09 131 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 ULK1O75385 1050 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 ERAL1O75616 437 aaKnown RBP11.7□□□□□ -0.54
HLCS-202ENST00000399120 GATBO75879 557 aaKnown RBP11.7□□□□□ -0.54
HLCS-202ENST00000399120 CASP5P51878 434 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 PSME3P61289 254 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 IL18Q14116 193 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 GRIK4Q16099 956 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 AFTPHQ6ULP2 937 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 SV2AQ7L0J3 742 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 PSTKQ8IV42 348 aaKnown RBP11.7□□□□□ -0.54
HLCS-202ENST00000399120 FERD3LQ96RJ6 166 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 SEMA6BQ9H3T3 888 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 NKIRAS2Q9NYR9 191 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 C2CD2Q9Y426 696 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 UGGT1Q9NYU2 1555 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 BIVM-ERCC5R4GMW8 1640 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 QSOX1O00391 747 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 METTL18O95568 372 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 CHST15Q7LFX5 561 aaPredicted RBP11.7□□□□□ -0.54
HLCS-202ENST00000399120 DNAJB3Q8WWF6 145 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 ZNF606Q8WXB4 792 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 C2orf49Q9BVC5 232 aaPredicted RBP11.7□□□□□ -0.54
HLCS-202ENST00000399120 MIR1-1HGQ9H1L0 117 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 AGO4Q9HCK5 861 aaKnown RBP11.7□□□□□ -0.54
HLCS-202ENST00000399120 TMEM39AQ9NV64 488 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 SETD4Q9NVD3 440 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 MRPL42Q9Y6G3 142 aaKnown RBP11.7□□□□□ -0.54
HLCS-202ENST00000399120 OAS3Q9Y6K5 1087 aaKnown RBP11.7□□□□□ -0.54
HLCS-202ENST00000399120 ERVK-7P63135 1459 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 FAM86C2PA6NEL3 165 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 SLC9A3R1O14745 358 aaPredicted RBP11.7□□□□□ -0.54
HLCS-202ENST00000399120 OPLAHO14841 1288 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 OR7A10O76100 309 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 USP17L7P0C7H9 530 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 COX4I1P13073 169 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 SLC6A2P23975 617 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 SREBF1P36956 1147 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 ATXN1P54253 815 aaKnown RBP11.7□□□□□ -0.54
HLCS-202ENST00000399120 Q4G0T1 1027 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 VCPIP1Q96JH7 1222 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 TDRD1Q9BXT4 1180 aaKnown RBP11.7□□□□□ -0.54
HLCS-202ENST00000399120 POPDC2Q9HBU9 364 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms