RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 FBXL19Q6PCT2 694 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 GDPD4Q6W3E5 623 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 LAPTM4BQ86VI4 370 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 TMPRSS6Q8IU80 811 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 CAMK1DQ8IU85 385 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 PGBD5Q8N414 524 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 SLC25A41Q8N5S1 370 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 DNAAF3Q8N9W5 541 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 CHST14Q8NCH0 376 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 BBOF1Q8ND07 529 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 OR2A12Q8NGT7 310 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 OR2T3Q8NH03 318 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 SPATA22Q8NHS9 363 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 FRS2Q8WU20 508 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 EZH1Q92800 747 aaPredicted RBP9.03□□□□□ -0.96
BRCC3-206ENST00000399042 PTPRN2Q92932 1015 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 SIPA1Q96FS4 1042 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 GABRG3Q99928 467 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 HINFPQ9BQA5 517 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 RHOXF2Q9BQY4 288 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 TRIM51Q9BSJ1 452 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 OSBPL1AQ9BXW6 950 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 ADGRE3Q9BY15 652 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 DPH5Q9H2P9 285 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 TMEM245Q9H330 911 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 FBRSQ9HAH7 460 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 PRSS16Q9NQE7 514 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 LHX3Q9UBR4 397 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 NCKAP1Q9Y2A7 1128 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 ATP8A1Q9Y2Q0 1164 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 PCDHGC4Q9Y5F7 938 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 RAI2Q9Y5P3 530 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 TICRRQ7Z2Z1 1910 aa9.03□□□□□ -0.96
BRCC3-206ENST00000399042 ANTXRLA6NF34 631 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 MUSKO15146 869 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 ALOX15BO15296 676 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 RAD51CO43502 376 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 LAMTOR5O43504 91 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 ADAM23O75077 832 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 RNASEH2AO75792 299 aaKnown RBP9.02□□□□□ -0.97
BRCC3-206ENST00000399042 PIGNO95427 931 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 CD160O95971 181 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 MT-CYBP00156 380 aaPredicted RBP9.02□□□□□ -0.97
BRCC3-206ENST00000399042 ADH1BP00325 375 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 PDGFBP01127 241 aaPredicted RBP9.02□□□□□ -0.97
BRCC3-206ENST00000399042 RPS9P46781 194 aaKnown RBP9.02□□□□□ -0.97
BRCC3-206ENST00000399042 RGRP47804 291 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 CXCL12P48061 93 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 SLC7A5Q01650 507 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 GUCY2DQ02846 1103 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 NIPAL4Q0D2K0 466 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 MTAPQ13126 283 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 MPP3Q13368 585 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 PTK6Q13882 451 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 SPARCL1Q14515 664 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 CRY1Q16526 586 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 KCTD19Q17RG1 926 aaPredicted RBP9.02□□□□□ -0.97
BRCC3-206ENST00000399042 GLE1Q53GS7 698 aaKnown RBP9.02□□□□□ -0.97
BRCC3-206ENST00000399042 ANO7Q6IWH7 933 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 NCEH1Q6PIU2 408 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 SYT13Q7L8C5 426 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 ZNF572Q7Z3I7 529 aaPredicted RBP9.02□□□□□ -0.97
BRCC3-206ENST00000399042 PCGF5Q86SE9 256 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 LINC00523Q86TU6 105 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 TTC7BQ86TV6 843 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 SPEM1Q8N4L4 309 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 MMGT1Q8N4V1 131 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 CNTD1Q8N815 330 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 LPCAT1Q8NF37 534 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 PIP4K2CQ8TBX8 421 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 IFT81Q8WYA0 676 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 UBXN4Q92575 508 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 RNF166Q96A37 237 aaPredicted RBP9.02□□□□□ -0.97
BRCC3-206ENST00000399042 RTP4Q96DX8 246 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 IMP4Q96G21 291 aaKnown RBP9.02□□□□□ -0.97
BRCC3-206ENST00000399042 SNF8Q96H20 258 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 LRIG1Q96JA1 1093 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 ZNF641Q96N77 438 aaPredicted RBP9.02□□□□□ -0.97
BRCC3-206ENST00000399042 KLHL32Q96NJ5 620 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 HHIPQ96QV1 700 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 FCRL5Q96RD9 977 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 TUBGCP5Q96RT8 1024 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 LRRC1Q9BTT6 524 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 FICDQ9BVA6 458 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 SUV39H2Q9H5I1 410 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 LRRC40Q9H9A6 602 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 L2HGDHQ9H9P8 463 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 ETNK1Q9HBU6 452 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 VPS45Q9NRW7 570 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 POLR3BQ9NW08 1133 aaPredicted RBP9.02□□□□□ -0.97
BRCC3-206ENST00000399042 ANAPC5Q9UJX4 755 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 TPX2Q9ULW0 747 aaKnown RBP9.02□□□□□ -0.97
BRCC3-206ENST00000399042 CHKBQ9Y259 395 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 SNX24Q9Y343 169 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 PCDHB9Q9Y5E1 797 aa9.02□□□□□ -0.97
BRCC3-206ENST00000399042 A0A1W2PQ67 120 aa9.01□□□□□ -0.97
BRCC3-206ENST00000399042 CHURC1-FNTBB4DL54 471 aa9.01□□□□□ -0.97
BRCC3-206ENST00000399042 GOLGA8MH3BSY2 632 aa9.01□□□□□ -0.97
BRCC3-206ENST00000399042 ZNF821O75541 412 aaPredicted RBP9.01□□□□□ -0.97
BRCC3-206ENST00000399042 GJB3O75712 270 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms