RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 PPP6R3Q5H9R7 873 aaPredicted RBP13.59□□□□□ -0.23
VCX3A-202ENST00000398729 HGSNATQ68CP4 663 aa13.59□□□□□ -0.23
VCX3A-202ENST00000398729 GCNT7Q6ZNI0 430 aa13.59□□□□□ -0.23
VCX3A-202ENST00000398729 RFX8Q6ZV50 586 aa13.59□□□□□ -0.23
VCX3A-202ENST00000398729 ABI3BPQ7Z7G0 1075 aa13.59□□□□□ -0.23
VCX3A-202ENST00000398729 PDCD7Q8N8D1 485 aaKnown RBP13.59□□□□□ -0.23
VCX3A-202ENST00000398729 TRIM7Q9C029 511 aa13.59□□□□□ -0.23
VCX3A-202ENST00000398729 KLHL11Q9NVR0 708 aa13.59□□□□□ -0.23
VCX3A-202ENST00000398729 MFHAS1Q9Y4C4 1052 aa13.59□□□□□ -0.23
VCX3A-202ENST00000398729 HS3ST3A1Q9Y663 406 aa13.59□□□□□ -0.23
VCX3A-202ENST00000398729 IGLON5A6NGN9 336 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 SDC3O75056 442 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 LRCH4O75427 683 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 C1QL1O75973 258 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 CDK4P11802 303 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 PCK1P35558 622 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 ZBED6P86452 979 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 FGL2Q14314 439 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 GRM3Q14832 879 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 CYTH1Q15438 398 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 ZSCAN23Q3MJ62 389 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 KYAT3Q6YP21 454 aaKnown RBP13.58□□□□□ -0.24
VCX3A-202ENST00000398729 Q6ZSR6 202 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 CYP4V2Q6ZWL3 525 aaPredicted RBP13.58□□□□□ -0.24
VCX3A-202ENST00000398729 PTAR1Q7Z6K3 402 aaPredicted RBP13.58□□□□□ -0.24
VCX3A-202ENST00000398729 TTC7BQ86TV6 843 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 DCP2Q8IU60 420 aaKnown RBP13.58□□□□□ -0.24
VCX3A-202ENST00000398729 NETO2Q8NC67 525 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 OR13H1Q8NG92 308 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 CPLX3Q8WVH0 158 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 VOPP1Q96AW1 172 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 CELF6Q96J87 481 aaKnown RBP13.58□□□□□ -0.24
VCX3A-202ENST00000398729 BMFQ96LC9 184 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 KCTD15Q96SI1 283 aaPredicted RBP13.58□□□□□ -0.24
VCX3A-202ENST00000398729 C1QTNF2Q9BXJ5 285 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 CPEB1Q9BZB8 566 aaKnown RBP13.58□□□□□ -0.24
VCX3A-202ENST00000398729 SLC39A8Q9C0K1 460 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 PDFQ9HBH1 243 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 IFNKQ9P0W0 207 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 DKK3Q9UBP4 350 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 LHX3Q9UBR4 397 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 CAPN11Q9UMQ6 739 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 ITM2BQ9Y287 266 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 LUC7L2Q9Y383 392 aaKnown RBP13.58□□□□□ -0.24
VCX3A-202ENST00000398729 PCDHGA1Q9Y5H4 931 aa13.58□□□□□ -0.24
VCX3A-202ENST00000398729 EIF4E1BA6NMX2 242 aaKnown RBP13.57□□□□□ -0.24
VCX3A-202ENST00000398729 J3KR12 359 aa13.57□□□□□ -0.24
VCX3A-202ENST00000398729 FPGTO14772 594 aa13.57□□□□□ -0.24
VCX3A-202ENST00000398729 AREL1O15033 823 aa13.57□□□□□ -0.24
VCX3A-202ENST00000398729 PRAMEF11O60813 436 aa13.57□□□□□ -0.24
VCX3A-202ENST00000398729 RFPL3O75679 317 aa13.57□□□□□ -0.24
VCX3A-202ENST00000398729 TPM3P06753 285 aa13.57□□□□□ -0.24
VCX3A-202ENST00000398729 C1SP09871 688 aa13.57□□□□□ -0.24
VCX3A-202ENST00000398729 ERCC2P18074 760 aa13.57□□□□□ -0.24
VCX3A-202ENST00000398729 XPAP23025 273 aaPredicted RBP13.57□□□□□ -0.24
VCX3A-202ENST00000398729 ITPKBP27987 946 aa13.57□□□□□ -0.24
VCX3A-202ENST00000398729 HCAR3P49019 387 aa13.57□□□□□ -0.24
VCX3A-202ENST00000398729 PAPOLAP51003 745 aaKnown RBP13.57□□□□□ -0.24
VCX3A-202ENST00000398729 DNAJC3Q13217 504 aa13.57□□□□□ -0.24
VCX3A-202ENST00000398729 PIGHQ14442 188 aaPredicted RBP13.57□□□□□ -0.24
VCX3A-202ENST00000398729 SKOR2Q2VWA4 1001 aaPredicted RBP13.57□□□□□ -0.24
VCX3A-202ENST00000398729 DHRS13Q6UX07 377 aa13.57□□□□□ -0.24
VCX3A-202ENST00000398729 KANSL1Q7Z3B3 1105 aa13.57□□□□□ -0.24
VCX3A-202ENST00000398729 DENND6BQ8NEG7 585 aa13.57□□□□□ -0.24
VCX3A-202ENST00000398729 ASB12Q8WXK4 309 aa13.57□□□□□ -0.24
VCX3A-202ENST00000398729 IFT43Q96FT9 208 aa13.57□□□□□ -0.24
VCX3A-202ENST00000398729 EXOC2Q96KP1 924 aa13.57□□□□□ -0.24
VCX3A-202ENST00000398729 LENG8Q96PV6 779 aaPredicted RBP13.57□□□□□ -0.24
VCX3A-202ENST00000398729 ZWILCHQ9H900 591 aa13.57□□□□□ -0.24
VCX3A-202ENST00000398729 GGT7Q9UJ14 662 aa13.57□□□□□ -0.24
VCX3A-202ENST00000398729 POM121BA6NF01 834 aa13.56□□□□□ -0.24
VCX3A-202ENST00000398729 H3BRJ5 948 aa13.56□□□□□ -0.24
VCX3A-202ENST00000398729 DFFAO00273 331 aa13.56□□□□□ -0.24
VCX3A-202ENST00000398729 RAD51BO15315 384 aa13.56□□□□□ -0.24
VCX3A-202ENST00000398729 PALMO75781 387 aa13.56□□□□□ -0.24
VCX3A-202ENST00000398729 DGKAP23743 735 aa13.56□□□□□ -0.24
VCX3A-202ENST00000398729 ARL4AP40617 200 aa13.56□□□□□ -0.24
VCX3A-202ENST00000398729 RABIFP47224 123 aa13.56□□□□□ -0.24
VCX3A-202ENST00000398729 SUOXP51687 545 aa13.56□□□□□ -0.24
VCX3A-202ENST00000398729 NFKBIBQ15653 356 aa13.56□□□□□ -0.24
VCX3A-202ENST00000398729 BOLA3Q53S33 107 aa13.56□□□□□ -0.24
VCX3A-202ENST00000398729 HS1BP3Q53T59 392 aa13.56□□□□□ -0.24
VCX3A-202ENST00000398729 LRRC73Q5JTD7 316 aa13.56□□□□□ -0.24
VCX3A-202ENST00000398729 CFAP58Q5T655 872 aa13.56□□□□□ -0.24
VCX3A-202ENST00000398729 AFMIDQ63HM1 303 aa13.56□□□□□ -0.24
VCX3A-202ENST00000398729 SLC22A18ASQ8N1D0 253 aa13.56□□□□□ -0.24
VCX3A-202ENST00000398729 LZTR1Q8N653 840 aa13.56□□□□□ -0.24
VCX3A-202ENST00000398729 HCAR2Q8TDS4 363 aa13.56□□□□□ -0.24
VCX3A-202ENST00000398729 CXorf40AQ8TE69 158 aa13.56□□□□□ -0.24
VCX3A-202ENST00000398729 KLF6Q99612 283 aaPredicted RBP13.56□□□□□ -0.24
VCX3A-202ENST00000398729 C1QTNF7Q9BXJ2 289 aa13.56□□□□□ -0.24
VCX3A-202ENST00000398729 THAP2Q9H0W7 228 aa13.56□□□□□ -0.24
VCX3A-202ENST00000398729 SP110Q9HB58 689 aa13.56□□□□□ -0.24
VCX3A-202ENST00000398729 GPR27Q9NS67 375 aa13.56□□□□□ -0.24
VCX3A-202ENST00000398729 DNAJC28Q9NX36 388 aa13.56□□□□□ -0.24
VCX3A-202ENST00000398729 CWC15Q9P013 229 aaKnown RBP13.56□□□□□ -0.24
VCX3A-202ENST00000398729 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.56□□□□□ -0.24
VCX3A-202ENST00000398729 RAI2Q9Y5P3 530 aa13.56□□□□□ -0.24
VCX3A-202ENST00000398729 ARID1BQ8NFD5 2236 aaPredicted RBP13.55□□□□□ -0.24
VCX3A-202ENST00000398729 A0A087X0T9 212 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms