RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 PRKCGP05129 697 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 GSTT1P30711 240 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 CD68P34810 354 aaPredicted RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 MCCD1P59942 119 aaPredicted RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 MRPS6P82932 125 aaKnown RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 LIN52Q52LA3 116 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 CXCL17Q6UXB2 119 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 ANKRD23Q86SG2 305 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 SMARCD1Q96GM5 515 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 NAT9Q9BTE0 207 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 UPF3AQ9H1J1 476 aaKnown RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 VRTNQ9H8Y1 702 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 MID1IP1Q9NPA3 183 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 FAM105AQ9NUU6 356 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 RGS17Q9UGC6 210 aaPredicted RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 SORCS3Q9UPU3 1222 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 SLC27A5Q9Y2P5 690 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 LTBP4Q8N2S1 1624 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 RGSL1A5PLK6 1076 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 GIPC1O14908 333 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 GPR182O15218 404 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 SNNO75324 88 aaPredicted RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 CABYRO75952 493 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 CNTN5O94779 1100 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 ATP5BP06576 529 aaKnown RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 FAM58BPP0C7Q3 252 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 GFAPP14136 432 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 TFEBP19484 476 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 CHRM3P20309 590 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 PPARGP37231 505 aaPredicted RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 GRIK3Q13003 919 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 TRIM32Q13049 653 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 PTPRCAPQ14761 206 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 HSF5Q4G112 596 aaPredicted RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 CTXN3Q4LDR2 81 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 SETD3Q86TU7 594 aaPredicted RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 IFNLR1Q8IU57 520 aaPredicted RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 LGI2Q8N0V4 545 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 VAT1Q99536 393 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 FTHL17Q9BXU8 183 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 GBA3Q9H227 469 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 RGS18Q9NS28 235 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 KRT84Q9NSB2 600 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 DDX18Q9NVP1 670 aaKnown RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 CLIC5Q9NZA1 410 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 CD274Q9NZQ7 290 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 HACD3Q9P035 362 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 SLCO1B7G3V0H7 640 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 PAGE1O75459 146 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 APOA4P06727 396 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 GRK4P32298 578 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 LRRC23Q53EV4 343 aaPredicted RBP4.97□□□□□ -1.61
SMAD4-202ENST00000398417 ZRANB3Q5FWF4 1079 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 OTUD1Q5VV17 481 aaPredicted RBP4.97□□□□□ -1.61
SMAD4-202ENST00000398417 STEAP4Q687X5 459 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 RBM44Q6ZP01 1051 aaKnown RBP4.97□□□□□ -1.61
SMAD4-202ENST00000398417 PAQR9Q6ZVX9 377 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 ZNF276Q8N554 614 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 SKA2Q8WVK7 121 aaPredicted RBP4.97□□□□□ -1.61
SMAD4-202ENST00000398417 PRPF18Q99633 342 aaKnown RBP4.97□□□□□ -1.61
SMAD4-202ENST00000398417 EFHD1Q9BUP0 239 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 PLAC1Q9HBJ0 212 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 TRPC7Q9HCX4 862 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 RCOR3Q9P2K3 495 aaPredicted RBP4.97□□□□□ -1.61
SMAD4-202ENST00000398417 LRRC14BA6NHZ5 514 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 PSMD12O00232 456 aaPredicted RBP4.97□□□□□ -1.61
SMAD4-202ENST00000398417 H2AFYO75367 372 aaKnown RBP4.97□□□□□ -1.61
SMAD4-202ENST00000398417 FOSL1P15407 271 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 TBX4P57082 545 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 LILRA4P59901 499 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 LBRQ14739 615 aaKnown RBP4.97□□□□□ -1.61
SMAD4-202ENST00000398417 NRF1Q16656 503 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 C6orf52Q5T4I8 152 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 CLEC6AQ6EIG7 209 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 EPGNQ6UW88 154 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 C14orf80Q86SX3 495 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 DHFR2Q86XF0 187 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 SPAG16Q8N0X2 631 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 ZNF786Q8N393 782 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 KCTD13Q8WZ19 329 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 TSPAN17Q96FV3 270 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 CCDC167Q9P0B6 97 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 CRYL1Q9Y2S2 319 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 HMX2A2RU54 273 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 J3KR12 359 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 OR6B1O95007 311 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 CRTAMO95727 393 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 C1QAP02745 245 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 CCDC166P0CW27 439 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 GSTA3Q16772 222 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 TSTD2Q5T7W7 516 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 AGAP9Q5VTM2 703 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 TIGD7Q6NT04 549 aaPredicted RBP4.97□□□□□ -1.61
SMAD4-202ENST00000398417 ATAD1Q8NBU5 361 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 CDC26Q8NHZ8 85 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 CALML6Q8TD86 181 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 PHF12Q96QT6 1004 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 EPS15L1Q9UBC2 864 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 A0A087X1B8 175 aa4.97□□□□□ -1.61
SMAD4-202ENST00000398417 AP3B1O00203 1094 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms