RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 KCTD11Q693B1 232 aa19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 ASTLQ6HA08 431 aaPredicted RBP19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 ASRGL1Q7L266 308 aa19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 CAND1Q86VP6 1230 aaKnown RBP19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 MFSD6LQ8IWD5 586 aa19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 KLHDC8BQ8IXV7 354 aa19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 NAT16Q8N8M0 369 aa19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 FBF1Q8TES7 1133 aa19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 NECTIN4Q96NY8 510 aa19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 PPP1R2P1Q96PQ5 205 aa19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 CINPQ9BW66 212 aaPredicted RBP19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 EBF3Q9H4W6 596 aa19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 MLXIPLQ9NP71 852 aa19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 INTS6Q9UL03 887 aaKnown RBP19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 SZT2Q5T011 3432 aa19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 POC1B-GALNT4F8VUJ3 575 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 MUSKO15146 869 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 BANF1O75531 89 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 NFATC1O95644 943 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 CD160O95971 181 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 MT-CYBP00156 380 aaPredicted RBP19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 ADH5P11766 374 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 GEMP55040 296 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 CYTH1Q15438 398 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 PRPF38BQ5VTL8 546 aaKnown RBP19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 ADGRD1Q6QNK2 874 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 ZNF534Q76KX8 674 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 FITM2Q8N6M3 262 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 PYROXD1Q8WU10 500 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 ATP2A3Q93084 1043 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 ACDQ96AP0 544 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 FAM83CQ9BQN1 747 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 POLR1EQ9GZS1 481 aaKnown RBP19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 ACSS3Q9H6R3 686 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 NOD2Q9HC29 1040 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 XAB2Q9HCS7 855 aaKnown RBP19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 RABGEF1Q9UJ41 708 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 USH1CQ9Y6N9 552 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 H3BQ06 376 aaPredicted RBP19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 DSC2Q02487 901 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 NIPAL4Q0D2K0 466 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 FASTKD3Q14CZ7 662 aaKnown RBP19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 PDGFRLQ15198 375 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 PITRM1Q5JRX3 1037 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 RETSATQ6NUM9 610 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 LRRC8BQ6P9F7 803 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 PARM1Q6UWI2 310 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 ZNF398Q8TD17 642 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 KLHL29Q96CT2 875 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 IMP4Q96G21 291 aaKnown RBP19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 PSKH2Q96QS6 385 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 KXD1Q9BQD3 176 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 SLC2A11Q9BYW1 496 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 PLA2G2FQ9BZM2 168 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 LRRC40Q9H9A6 602 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 TXLNGQ9NUQ3 528 aa19.55■□□□□ 0.72
PDLIM2-204ENST00000397760 FOXO6A8MYZ6 492 aa19.54■□□□□ 0.72
PDLIM2-204ENST00000397760 HOXC11O43248 304 aaPredicted RBP19.54■□□□□ 0.72
PDLIM2-204ENST00000397760 PABPC1P11940 636 aaKnown RBP19.54■□□□□ 0.72
PDLIM2-204ENST00000397760 MLNP12872 115 aa19.54■□□□□ 0.72
PDLIM2-204ENST00000397760 ALDH3A1P30838 453 aa19.54■□□□□ 0.72
PDLIM2-204ENST00000397760 GPX6P59796 221 aa19.54■□□□□ 0.72
PDLIM2-204ENST00000397760 FCHO2Q0JRZ9 810 aa19.54■□□□□ 0.72
PDLIM2-204ENST00000397760 OLIG2Q13516 323 aa19.54■□□□□ 0.72
PDLIM2-204ENST00000397760 GRM2Q14416 872 aa19.54■□□□□ 0.72
PDLIM2-204ENST00000397760 SETDB1Q15047 1291 aa19.54■□□□□ 0.72
PDLIM2-204ENST00000397760 ZKSCAN8Q15776 578 aaPredicted RBP19.54■□□□□ 0.72
PDLIM2-204ENST00000397760 INO80DQ53TQ3 878 aaPredicted RBP19.54■□□□□ 0.72
PDLIM2-204ENST00000397760 TBC1D1Q86TI0 1168 aaPredicted RBP19.54■□□□□ 0.72
PDLIM2-204ENST00000397760 PRPF39Q86UA1 669 aaKnown RBP19.54■□□□□ 0.72
PDLIM2-204ENST00000397760 YAF2Q8IY57 180 aa19.54■□□□□ 0.72
PDLIM2-204ENST00000397760 SUSD6Q92537 303 aa19.54■□□□□ 0.72
PDLIM2-204ENST00000397760 ELSPBP1Q96BH3 223 aa19.54■□□□□ 0.72
PDLIM2-204ENST00000397760 MGME1Q9BQP7 344 aa19.54■□□□□ 0.72
PDLIM2-204ENST00000397760 CHD5Q8TDI0 1954 aa19.54■□□□□ 0.72
PDLIM2-204ENST00000397760 TTC24A2A3L6 582 aaPredicted RBP19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 TM9SF1O15321 606 aa19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 EDF1O60869 148 aaKnown RBP19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 USP12O75317 370 aa19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 SPAG6O75602 509 aa19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 DCTN3O75935 186 aa19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 TMCC1O94876 653 aa19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 UNC5CO95185 931 aa19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 CD86P42081 329 aa19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 MAGEA3P43357 314 aa19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 CCDC85BQ15834 202 aaPredicted RBP19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 FUT11Q495W5 492 aa19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 ANKMY2Q8IV38 441 aa19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 ARRDC2Q8TBH0 407 aa19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 LRRC8CQ8TDW0 803 aa19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 FGF14Q92915 247 aa19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 SEMA3CQ99985 751 aa19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 FBXO10Q9UK96 956 aa19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 PHTF1Q9UMS5 762 aa19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 PMPCBO75439 489 aa19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 MT-CO1P00395 513 aa19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 MMP2P08253 660 aa19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 PSMC3P17980 439 aa19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 CA4P22748 312 aa19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 MPP3Q13368 585 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms