RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 PITRM1Q5JRX3 1037 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 VARS2Q5ST30 1063 aaKnown RBP10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 AGAP9Q5VTM2 703 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 ATP6V0D2Q8N8Y2 350 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 OR7D4Q8NG98 312 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 ATP6V1E2Q96A05 226 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 ZNF333Q96JL9 665 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 CCSER2Q9H7U1 834 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 LRCH1Q9Y2L9 728 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 RAP2CQ9Y3L5 183 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 MTF2Q9Y483 593 aaPredicted RBP10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 TCAF1Q9Y4C2 921 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 ARL5AQ9Y689 179 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 MYO7AQ13402 2215 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 PRSS56P0CW18 603 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 HOXD8P13378 290 aaPredicted RBP10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 CCNCP24863 283 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 GABRB3P28472 473 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 FMO4P31512 558 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 RALGDSQ12967 914 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 TBCCQ15814 346 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 INSCQ1MX18 579 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 BNC2Q6ZN30 1099 aaPredicted RBP10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 SCD5Q86SK9 330 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 SERINC5Q86VE9 423 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 SKA2Q8WVK7 121 aaPredicted RBP10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 NT5C3BQ969T7 300 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 SMIM14Q96QK8 99 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 TRIM62Q9BVG3 475 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 MRPL1Q9BYD6 325 aaKnown RBP10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 ZYG11BQ9C0D3 744 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 MUC3BQ9H195 1237 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 STARD7Q9NQZ5 370 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 OSER1Q9NX31 292 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 DONSONQ9NYP3 566 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 ADAM28Q9UKQ2 775 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 AURKCQ9UQB9 309 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 PAPPA2Q9BXP8 1791 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 CAPN14A8MX76 684 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 KCNU1A8MYU2 1149 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 G3V2L1 256 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 MAFKO60675 156 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 RHOBTB1O94844 696 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 ITGAXP20702 1163 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 RAB27AP51159 221 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 CCL23P55773 120 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 MED21Q13503 144 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 PRSS55Q6UWB4 352 aaPredicted RBP10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 C17orf99Q6UX52 265 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 OR13C4Q8NGS5 318 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 OR6K2Q8NGY2 324 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 OXSMQ9NWU1 459 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 NSMCE4AQ9NXX6 385 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 POMPQ9Y244 141 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 BTRCQ9Y297 605 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 ANKRD12Q6UB98 2062 aa10.52□□□□□ -0.72
CPSF1P1-201ENST00000397477 HEATR9A2RTY3 570 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 ZNF487B1APH4 448 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 SEPT4O43236 478 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 PEX1O43933 1283 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 SLC35E2BP0CK96 405 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 NELFEP18615 380 aaKnown RBP10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 CTGFP29279 349 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 MRPS35P82673 323 aaKnown RBP10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 SATB1Q01826 763 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 BTKQ06187 659 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 CYTH1Q15438 398 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 NFE2Q16621 373 aaPredicted RBP10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 ZRANB3Q5FWF4 1079 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 FBXL22Q6P050 247 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 IYDQ6PHW0 289 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 LINGO4Q6UY18 593 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 DENND1CQ8IV53 801 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 LPCAT1Q8NF37 534 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 BHLHE22Q8NFJ8 381 aaPredicted RBP10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 DNAJC1Q96KC8 554 aaKnown RBP10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 CNBD2Q96M20 576 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 WDR41Q9HAD4 459 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 ZNF212Q9UDV6 495 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 PCDHB7Q9Y5E2 793 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 A0A088AWK7 358 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 CAPN8A6NHC0 703 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 TBKBP1A7MCY6 615 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 HHLA1C9JL84 531 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 FGF10O15520 208 aaPredicted RBP10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 TLR5O60602 858 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 MAGEC1O60732 1142 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 PQBP1O60828 265 aaKnown RBP10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 CABYRO75952 493 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 SIX3O95343 332 aaPredicted RBP10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 ALDH2P05091 517 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 ACTR3P61158 418 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 PTK2BQ14289 1009 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 PIK3R6Q5UE93 754 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 RAB44Q7Z6P3 723 aaPredicted RBP10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 MON1AQ86VX9 555 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 KBTBD2Q8IY47 623 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 BBS5Q8N3I7 341 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 LZTR1Q8N653 840 aa10.52□□□□□ -0.73
CPSF1P1-201ENST00000397477 RTL3Q8N8U3 475 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms