RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 OLIG2Q13516 323 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 SPARCL1Q14515 664 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 SLC14A2Q15849 920 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 PTPRNQ16849 979 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 FNBP1LQ5T0N5 605 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 C22orf39Q6P5X5 142 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 PPP1R21Q6ZMI0 780 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 SFTPA1Q8IWL2 248 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 CYB5D2Q8WUJ1 264 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 MRGPRX2Q96LB1 330 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 FRMD8Q9BZ67 464 aaPredicted RBP17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 CIPCQ9C0C6 399 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 PHACTR1Q9C0D0 580 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 CEP44Q9C0F1 390 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 LRRC40Q9H9A6 602 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 NOD2Q9HC29 1040 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 VPS45Q9NRW7 570 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 GOLGA6AQ9NYA3 693 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 E7ESA3 106 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 INSIG1O15503 277 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 TIMM44O43615 452 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 PMPCBO75439 489 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 KAT7O95251 611 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 CHRNB1P11230 501 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 MLNP12872 115 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 MAGEA3P43357 314 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 CSNK1DP48730 415 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 SCNN1BP51168 640 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 ARL4CP56559 192 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 WNT3AP56704 352 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 HIF1AQ16665 826 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 MSS51Q4VC12 460 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 ATXN7L2Q5T6C5 722 aaPredicted RBP17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 LRRC8BQ6P9F7 803 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 TSSK4Q6SA08 328 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 TMC3Q7Z5M5 1100 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 PCDH20Q8N6Y1 951 aaKnown RBP17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 IPMKQ8NFU5 416 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 FRS2Q8WU20 508 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 FAM3CQ92520 227 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 NELL1Q92832 810 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 GDAP1L1Q96MZ0 367 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 TM6SF2Q9BZW4 377 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 TSPYL1Q9H0U9 437 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 SCUBE2Q9NQ36 999 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 SPATA6Q9NWH7 488 aaPredicted RBP17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 C2orf42Q9NWW7 574 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 F5P12259 2224 aa17.12■□□□□ 0.33
TSPAN4-205ENST00000397406 SPECC1L-ADORA2AF8WAN1 911 aa17.12■□□□□ 0.33
TSPAN4-205ENST00000397406 USP12O75317 370 aa17.12■□□□□ 0.33
TSPAN4-205ENST00000397406 AVILO75366 819 aa17.12■□□□□ 0.33
TSPAN4-205ENST00000397406 SERPINF2P08697 491 aa17.12■□□□□ 0.33
TSPAN4-205ENST00000397406 CTHP32929 405 aa17.12■□□□□ 0.33
TSPAN4-205ENST00000397406 GRIA2P42262 883 aa17.12■□□□□ 0.33
TSPAN4-205ENST00000397406 SARNPP82979 210 aaKnown RBP17.12■□□□□ 0.33
TSPAN4-205ENST00000397406 DLG2Q15700 870 aa17.12■□□□□ 0.33
TSPAN4-205ENST00000397406 PREPLQ4J6C6 727 aaPredicted RBP17.12■□□□□ 0.33
TSPAN4-205ENST00000397406 RALGPS1Q5JS13 557 aa17.12■□□□□ 0.33
TSPAN4-205ENST00000397406 NAPEPLDQ6IQ20 393 aa17.12■□□□□ 0.33
TSPAN4-205ENST00000397406 NCEH1Q6PIU2 408 aa17.12■□□□□ 0.33
TSPAN4-205ENST00000397406 RANBP10Q6VN20 620 aa17.12■□□□□ 0.33
TSPAN4-205ENST00000397406 SRLQ86TD4 932 aa17.12■□□□□ 0.33
TSPAN4-205ENST00000397406 CCDC25Q86WR0 208 aa17.12■□□□□ 0.33
TSPAN4-205ENST00000397406 PDIK1LQ8N165 341 aa17.12■□□□□ 0.33
TSPAN4-205ENST00000397406 AGGF1Q8N302 714 aaeCLIP17.12■□□□□ 0.331e-7■■■■□ 23.7
TSPAN4-205ENST00000397406 OR2AP1Q8NGE2 309 aa17.12■□□□□ 0.33
TSPAN4-205ENST00000397406 NELL2Q99435 816 aa17.12■□□□□ 0.33
TSPAN4-205ENST00000397406 TBL1YQ9BQ87 522 aa17.12■□□□□ 0.33
TSPAN4-205ENST00000397406 FICDQ9BVA6 458 aa17.12■□□□□ 0.33
TSPAN4-205ENST00000397406 TNKS2Q9H2K2 1166 aa17.12■□□□□ 0.33
TSPAN4-205ENST00000397406 FBRSL1Q9HCM7 1045 aaKnown RBP17.12■□□□□ 0.33
TSPAN4-205ENST00000397406 XAB2Q9HCS7 855 aaKnown RBP17.12■□□□□ 0.33
TSPAN4-205ENST00000397406 CASS4Q9NQ75 786 aa17.12■□□□□ 0.33
TSPAN4-205ENST00000397406 PRMT8Q9NR22 394 aaPredicted RBP17.12■□□□□ 0.33
TSPAN4-205ENST00000397406 TBC1D3BA6NDS4 549 aa17.11■□□□□ 0.33
TSPAN4-205ENST00000397406 EIF3HO15372 352 aaKnown RBP eCLIP17.11■□□□□ 0.33
TSPAN4-205ENST00000397406 BANF1O75531 89 aa17.11■□□□□ 0.33
TSPAN4-205ENST00000397406 IGSF6O95976 241 aa17.11■□□□□ 0.33
TSPAN4-205ENST00000397406 GSRP00390 522 aa17.11■□□□□ 0.33
TSPAN4-205ENST00000397406 AGTP01019 485 aa17.11■□□□□ 0.33
TSPAN4-205ENST00000397406 APODP05090 189 aa17.11■□□□□ 0.33
TSPAN4-205ENST00000397406 GALK1P51570 392 aa17.11■□□□□ 0.33
TSPAN4-205ENST00000397406 DHX9Q08211 1270 aaKnown RBP17.11■□□□□ 0.33
TSPAN4-205ENST00000397406 MTM1Q13496 603 aa17.11■□□□□ 0.33
TSPAN4-205ENST00000397406 SLMAPQ14BN4 828 aa17.11■□□□□ 0.33
TSPAN4-205ENST00000397406 PCSK7Q16549 785 aa17.11■□□□□ 0.33
TSPAN4-205ENST00000397406 DENND5AQ6IQ26 1287 aa17.11■□□□□ 0.33
TSPAN4-205ENST00000397406 CEP128Q6ZU80 1094 aa17.11■□□□□ 0.33
TSPAN4-205ENST00000397406 CENPUQ71F23 418 aa17.11■□□□□ 0.33
TSPAN4-205ENST00000397406 LINC00523Q86TU6 105 aa17.11■□□□□ 0.33
TSPAN4-205ENST00000397406 RELL1Q8IUW5 271 aa17.11■□□□□ 0.33
TSPAN4-205ENST00000397406 KDM1BQ8NB78 822 aa17.11■□□□□ 0.33
TSPAN4-205ENST00000397406 OR52K1Q8NGK4 314 aa17.11■□□□□ 0.33
TSPAN4-205ENST00000397406 VOPP1Q96AW1 172 aa17.11■□□□□ 0.33
TSPAN4-205ENST00000397406 P2RY13Q9BPV8 354 aa17.11■□□□□ 0.33
TSPAN4-205ENST00000397406 APOL2Q9BQE5 337 aa17.11■□□□□ 0.33
TSPAN4-205ENST00000397406 WDR83Q9BRX9 315 aaKnown RBP17.11■□□□□ 0.33
TSPAN4-205ENST00000397406 CHRDQ9H2X0 955 aa17.11■□□□□ 0.33
TSPAN4-205ENST00000397406 LMAN1LQ9HAT1 526 aa17.11■□□□□ 0.33
TSPAN4-205ENST00000397406 ARFGAP3Q9NP61 516 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms