RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 VOPP1Q96AW1 172 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 TADA1Q96BN2 335 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 MLPHQ9BV36 600 aaPredicted RBP23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 OSBPL1AQ9BXW6 950 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 SARDHQ9UL12 918 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 AAR2Q9Y312 384 aaKnown RBP23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 RAI2Q9Y5P3 530 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 GOLGA6CA6NDK9 693 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 GOLGA6BA6NDN3 693 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 KPNA3O00505 521 aaPredicted RBP23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 GOLGA6DP0CG33 693 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 ADCY8P40145 1251 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 TERF1P54274 439 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 RPS14P62263 151 aaKnown RBP23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 BASP1P80723 227 aaKnown RBP23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 TRAF2Q12933 501 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 MPP3Q13368 585 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 SLC14A2Q15849 920 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 PCSK7Q16549 785 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 POM121L1PQ3SYA9 428 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 FAM46CQ5VWP2 391 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 CACUL1Q86Y37 369 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 PAF1Q8N7H5 531 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 LRRN4CLQ8ND94 238 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 TSTD1Q8NFU3 115 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 ZNF641Q96N77 438 aaPredicted RBP23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 KLHL32Q96NJ5 620 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 HHIPQ96QV1 700 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 LRRC1Q9BTT6 524 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 MKRN2Q9H000 416 aaKnown RBP23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 SLC6A17Q9H1V8 727 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 SUV39H2Q9H5I1 410 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 VPS45Q9NRW7 570 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 GOLGA6AQ9NYA3 693 aa23.84■■□□□ 1.41
TSPAN4-203ENST00000397397 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.83■■□□□ 1.4
TSPAN4-203ENST00000397397 E7EVH7 732 aa23.83■■□□□ 1.4
TSPAN4-203ENST00000397397 SOCS5O75159 536 aa23.83■■□□□ 1.4
TSPAN4-203ENST00000397397 CA4P22748 312 aa23.83■■□□□ 1.4
TSPAN4-203ENST00000397397 CXCL12P48061 93 aa23.83■■□□□ 1.4
TSPAN4-203ENST00000397397 LMAN1P49257 510 aa23.83■■□□□ 1.4
TSPAN4-203ENST00000397397 CST6Q15828 149 aa23.83■■□□□ 1.4
TSPAN4-203ENST00000397397 KDELC1Q6UW63 502 aa23.83■■□□□ 1.4
TSPAN4-203ENST00000397397 IPMKQ8NFU5 416 aa23.83■■□□□ 1.4
TSPAN4-203ENST00000397397 PDCD6IPQ8WUM4 868 aaKnown RBP23.83■■□□□ 1.4
TSPAN4-203ENST00000397397 LRRC45Q96CN5 670 aa23.83■■□□□ 1.4
TSPAN4-203ENST00000397397 SPATA6Q9NWH7 488 aaPredicted RBP23.83■■□□□ 1.4
TSPAN4-203ENST00000397397 KMT2EQ8IZD2 1858 aa23.83■■□□□ 1.4
TSPAN4-203ENST00000397397 PSMD3O43242 534 aa23.82■■□□□ 1.4
TSPAN4-203ENST00000397397 ALDH1A2O94788 518 aa23.82■■□□□ 1.4
TSPAN4-203ENST00000397397 ADH1BP00325 375 aa23.82■■□□□ 1.4
TSPAN4-203ENST00000397397 GABRG2P18507 467 aa23.82■■□□□ 1.4
TSPAN4-203ENST00000397397 CCR3P51677 355 aa23.82■■□□□ 1.4
TSPAN4-203ENST00000397397 WNT3AP56704 352 aa23.82■■□□□ 1.4
TSPAN4-203ENST00000397397 SEMA5AQ13591 1074 aa23.82■■□□□ 1.4
TSPAN4-203ENST00000397397 SYCP2LQ5T4T6 812 aa23.82■■□□□ 1.4
TSPAN4-203ENST00000397397 CFAP58Q5T655 872 aa23.82■■□□□ 1.4
TSPAN4-203ENST00000397397 KDELC2Q7Z4H8 507 aa23.82■■□□□ 1.4
TSPAN4-203ENST00000397397 TMEM105Q8N8V8 129 aa23.82■■□□□ 1.4
TSPAN4-203ENST00000397397 HMGB4Q8WW32 186 aa23.82■■□□□ 1.4
TSPAN4-203ENST00000397397 PRCCQ92733 491 aaPredicted RBP23.82■■□□□ 1.4
TSPAN4-203ENST00000397397 SIPA1Q96FS4 1042 aa23.82■■□□□ 1.4
TSPAN4-203ENST00000397397 TDRD1Q9BXT4 1180 aaKnown RBP23.82■■□□□ 1.4
TSPAN4-203ENST00000397397 TRIM31Q9BZY9 425 aa23.82■■□□□ 1.4
TSPAN4-203ENST00000397397 BCCIPQ9P287 314 aaKnown RBP eCLIP23.82■■□□□ 1.4
TSPAN4-203ENST00000397397 CHKBQ9Y259 395 aa23.82■■□□□ 1.4
TSPAN4-203ENST00000397397 HCN4Q9Y3Q4 1203 aa23.82■■□□□ 1.4
TSPAN4-203ENST00000397397 EFCAB8A8MWE9 144 aa23.81■■□□□ 1.4
TSPAN4-203ENST00000397397 TRAFD1O14545 582 aaPredicted RBP23.81■■□□□ 1.4
TSPAN4-203ENST00000397397 MID1O15344 667 aa23.81■■□□□ 1.4
TSPAN4-203ENST00000397397 HTRA2O43464 458 aaPredicted RBP23.81■■□□□ 1.4
TSPAN4-203ENST00000397397 SLU7O95391 586 aaKnown RBP23.81■■□□□ 1.4
TSPAN4-203ENST00000397397 NDUFV2P19404 249 aa23.81■■□□□ 1.4
TSPAN4-203ENST00000397397 SLC8A1P32418 973 aa23.81■■□□□ 1.4
TSPAN4-203ENST00000397397 METAP1P53582 386 aa23.81■■□□□ 1.4
TSPAN4-203ENST00000397397 ZNF805Q5CZA5 627 aa23.81■■□□□ 1.4
TSPAN4-203ENST00000397397 ARMC12Q5T9G4 340 aa23.81■■□□□ 1.4
TSPAN4-203ENST00000397397 KIAA1324Q6UXG2 1013 aaKnown RBP23.81■■□□□ 1.4
TSPAN4-203ENST00000397397 KLHDC8BQ8IXV7 354 aa23.81■■□□□ 1.4
TSPAN4-203ENST00000397397 PGBD3Q8N328 593 aa23.81■■□□□ 1.4
TSPAN4-203ENST00000397397 PDCD7Q8N8D1 485 aaKnown RBP23.81■■□□□ 1.4
TSPAN4-203ENST00000397397 ARRDC3Q96B67 414 aa23.81■■□□□ 1.4
TSPAN4-203ENST00000397397 IFT43Q96FT9 208 aa23.81■■□□□ 1.4
TSPAN4-203ENST00000397397 PPP1R16AQ96I34 528 aa23.81■■□□□ 1.4
TSPAN4-203ENST00000397397 MRGPRX2Q96LB1 330 aa23.81■■□□□ 1.4
TSPAN4-203ENST00000397397 MRGPRX1Q96LB2 322 aa23.81■■□□□ 1.4
TSPAN4-203ENST00000397397 DYRK4Q9NR20 520 aa23.81■■□□□ 1.4
TSPAN4-203ENST00000397397 DNTTP04053 509 aa23.8■■□□□ 1.4
TSPAN4-203ENST00000397397 C5AR1P21730 350 aa23.8■■□□□ 1.4
TSPAN4-203ENST00000397397 TNNT3P45378 269 aaPredicted RBP23.8■■□□□ 1.4
TSPAN4-203ENST00000397397 SLC7A5Q01650 507 aa23.8■■□□□ 1.4
TSPAN4-203ENST00000397397 SPARCL1Q14515 664 aa23.8■■□□□ 1.4
TSPAN4-203ENST00000397397 GLE1Q53GS7 698 aaKnown RBP23.8■■□□□ 1.4
TSPAN4-203ENST00000397397 ANO7Q6IWH7 933 aa23.8■■□□□ 1.4
TSPAN4-203ENST00000397397 MAMSTRQ6ZN01 415 aa23.8■■□□□ 1.4
TSPAN4-203ENST00000397397 ERP44Q9BS26 406 aa23.8■■□□□ 1.4
TSPAN4-203ENST00000397397 FICDQ9BVA6 458 aa23.8■■□□□ 1.4
TSPAN4-203ENST00000397397 FSD1LQ9BXM9 530 aa23.8■■□□□ 1.4
TSPAN4-203ENST00000397397 RAB17Q9H0T7 212 aa23.8■■□□□ 1.4
TSPAN4-203ENST00000397397 LRRC40Q9H9A6 602 aa23.8■■□□□ 1.4
TSPAN4-203ENST00000397397 UTP11Q9Y3A2 253 aaKnown RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms