RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 K7EM74 188 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 YY2O15391 372 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 P4HA2O15460 535 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 MED7O43513 233 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 DUX1O43812 170 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 ZNF821O75541 412 aaPredicted RBP9.57□□□□□ -0.88
NEDD9-203ENST00000397378 RHOCP08134 193 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 L1CAMP32004 1257 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 RECQLP46063 649 aaPredicted RBP9.57□□□□□ -0.88
NEDD9-203ENST00000397378 LRRC63Q05C16 580 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 SGCGQ13326 291 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 PTK2BQ14289 1009 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 TAF5Q15542 800 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 EIF2S3LQ2VIR3 472 aaKnown RBP9.57□□□□□ -0.88
NEDD9-203ENST00000397378 TPRG1LQ5T0D9 272 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 ANKRD40Q6AI12 368 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 DENND1BQ6P3S1 775 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 C22orf39Q6P5X5 142 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 DPY19L3Q6ZPD9 716 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 SETD3Q86TU7 594 aaPredicted RBP9.57□□□□□ -0.88
NEDD9-203ENST00000397378 PHACTR4Q8IZ21 702 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 CACNA2D3Q8IZS8 1091 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 DEFB106AQ8N104 65 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 Q8N9G6 341 aaPredicted RBP9.57□□□□□ -0.88
NEDD9-203ENST00000397378 PRR7Q8TB68 274 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 GRIN3AQ8TCU5 1115 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 RAB7BQ96AH8 199 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 EPAS1Q99814 870 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 LRRC61Q9BV99 259 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 SLC13A1Q9BZW2 595 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 RNF215Q9Y6U7 377 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 CELSR1Q9NYQ6 3014 aa9.57□□□□□ -0.88
NEDD9-203ENST00000397378 ZNF106Q9H2Y7 1883 aaKnown RBP9.57□□□□□ -0.88
NEDD9-203ENST00000397378 SYNJ2BP-COX16A0A087WUM0 186 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 IGLON5A6NGN9 336 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 MKRN2OSH3BPM6 223 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 TOR1BO14657 336 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 CAPN5O15484 640 aaPredicted RBP9.56□□□□□ -0.88
NEDD9-203ENST00000397378 TSPAN6O43657 245 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 HSF2BPO75031 334 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 PAGE1O75459 146 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 CCL4P13236 92 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 TSHRP16473 764 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 OAS2P29728 719 aaKnown RBP9.56□□□□□ -0.88
NEDD9-203ENST00000397378 UGT1A3P35503 534 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 GGCXP38435 758 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 THOP1P52888 689 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 PMS1P54277 932 aaKnown RBP9.56□□□□□ -0.88
NEDD9-203ENST00000397378 YPEL5P62699 121 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 ZFP36L1Q07352 338 aaKnown RBP9.56□□□□□ -0.88
NEDD9-203ENST00000397378 SLC20A2Q08357 652 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 CETN1Q12798 172 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 PDCLQ13371 301 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 TCEA2Q15560 299 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 ALFQ53S48 1182 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 EFHC1Q5JVL4 640 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 FAXCQ5TGI0 409 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 LVRNQ6Q4G3 990 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 ASB18Q6ZVZ8 466 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 PARS2Q7L3T8 475 aaKnown RBP9.56□□□□□ -0.88
NEDD9-203ENST00000397378 RRAGAQ7L523 313 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 CCNJLQ8IV13 435 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 ARHGEF19Q8IW93 802 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 ZNF683Q8IZ20 524 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 PCDH20Q8N6Y1 951 aaKnown RBP9.56□□□□□ -0.88
NEDD9-203ENST00000397378 ZNF606Q8WXB4 792 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 MARVELD3Q96A59 401 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 POM121Q96HA1 1249 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 SLC45A3Q96JT2 553 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 SPATA32Q96LK8 384 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 KREMEN1Q96MU8 473 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 HEPHQ9BQS7 1158 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 CEP44Q9C0F1 390 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 CLPBQ9H078 707 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 CDH19Q9H159 772 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 TNKS2Q9H2K2 1166 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 COX16Q9P0S2 106 aa9.56□□□□□ -0.88
NEDD9-203ENST00000397378 ANKRD36A6QL64 1941 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 A0A0D9SEW6 157 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 A0A1B0GTL3 188 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 ARHGAP10A1A4S6 786 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 DRGXA6NNA5 263 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 M0QYT0 321 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 RAD1O60671 282 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 ZNF202O95125 648 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 LETM1O95202 739 aaPredicted RBP9.55□□□□□ -0.88
NEDD9-203ENST00000397378 PRF1P14222 555 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 SERPINH1P50454 418 aaKnown RBP9.55□□□□□ -0.88
NEDD9-203ENST00000397378 MRPL49Q13405 166 aaKnown RBP9.55□□□□□ -0.88
NEDD9-203ENST00000397378 PKP1Q13835 747 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 C16orf72Q14CZ0 275 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 MAP9Q49MG5 647 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 BRMS1LQ5PSV4 323 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 ZNF658Q5TYW1 1059 aaPredicted RBP9.55□□□□□ -0.88
NEDD9-203ENST00000397378 RETSATQ6NUM9 610 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 C16orf46Q6P387 395 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 LINGO4Q6UY18 593 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 ZNF783Q6ZMS7 281 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 TIPARPQ7Z3E1 657 aaKnown RBP9.55□□□□□ -0.88
NEDD9-203ENST00000397378 PLPP6Q8IY26 295 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms