RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 UGT2B4P06133 528 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 TCF4P15884 667 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 AKT2P31751 481 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 CCT8P50990 548 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 RPS21P63220 83 aaKnown RBP14.76□□□□□ -0.05
SEC13-208ENST00000397109 IL10RBQ08334 325 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 KRT81Q14533 505 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 RFTN1Q14699 578 aaPredicted RBP14.76□□□□□ -0.05
SEC13-208ENST00000397109 CYTH1Q15438 398 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 KIAA1161Q6NSJ0 714 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 TMCO3Q6UWJ1 677 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 LAYNQ6UX15 382 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 GDPD4Q6W3E5 623 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 PARS2Q7L3T8 475 aaKnown RBP14.76□□□□□ -0.05
SEC13-208ENST00000397109 MTERF4Q7Z6M4 381 aaKnown RBP14.76□□□□□ -0.05
SEC13-208ENST00000397109 NAXDQ8IW45 347 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 RHOT2Q8IXI1 618 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 OXR1Q8N573 874 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 TRIM58Q8NG06 486 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 KLHL32Q96NJ5 620 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 CSPG4P5Q96PW8 444 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 WDR24Q96S15 920 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 NAPGQ99747 312 aaPredicted RBP14.76□□□□□ -0.05
SEC13-208ENST00000397109 SP110Q9HB58 689 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 PCDH18Q9HCL0 1135 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 GDF3Q9NR23 364 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 LHX3Q9UBR4 397 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 PCDHB9Q9Y5E1 797 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 FADS3Q9Y5Q0 445 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 RCCD1A6NED2 376 aa14.75□□□□□ -0.05
SEC13-208ENST00000397109 DFFAO00273 331 aa14.75□□□□□ -0.05
SEC13-208ENST00000397109 WNT9AO14904 365 aa14.75□□□□□ -0.05
SEC13-208ENST00000397109 YKT6O15498 198 aa14.75□□□□□ -0.05
SEC13-208ENST00000397109 FLRT2O43155 660 aa14.75□□□□□ -0.05
SEC13-208ENST00000397109 TSPAN6O43657 245 aa14.75□□□□□ -0.05
SEC13-208ENST00000397109 PALMO75781 387 aa14.75□□□□□ -0.05
SEC13-208ENST00000397109 HNRNPA2B1P22626 353 aaKnown RBP14.75□□□□□ -0.05
SEC13-208ENST00000397109 AMPD1P23109 780 aa14.75□□□□□ -0.05
SEC13-208ENST00000397109 GKP32189 559 aa14.75□□□□□ -0.05
SEC13-208ENST00000397109 SERPINB6P35237 376 aa14.75□□□□□ -0.05
SEC13-208ENST00000397109 CDH6P55285 790 aa14.75□□□□□ -0.05
SEC13-208ENST00000397109 ZNF284Q2VY69 593 aa14.75□□□□□ -0.05
SEC13-208ENST00000397109 TMCO4Q5TGY1 634 aa14.75□□□□□ -0.05
SEC13-208ENST00000397109 TXNRD3NBQ6F5E7 133 aa14.75□□□□□ -0.05
SEC13-208ENST00000397109 DBX2Q6ZNG2 339 aa14.75□□□□□ -0.05
SEC13-208ENST00000397109 NPWQ8N729 165 aa14.75□□□□□ -0.05
SEC13-208ENST00000397109 FAM174AQ8TBP5 190 aa14.75□□□□□ -0.05
SEC13-208ENST00000397109 HCAR2Q8TDS4 363 aa14.75□□□□□ -0.05
SEC13-208ENST00000397109 CALR3Q96L12 384 aaKnown RBP14.75□□□□□ -0.05
SEC13-208ENST00000397109 ZNF599Q96NL3 588 aa14.75□□□□□ -0.05
SEC13-208ENST00000397109 ELF4Q99607 663 aaPredicted RBP14.75□□□□□ -0.05
SEC13-208ENST00000397109 ERVMER34-1Q9H9K5 563 aa14.75□□□□□ -0.05
SEC13-208ENST00000397109 DKK3Q9UBP4 350 aa14.75□□□□□ -0.05
SEC13-208ENST00000397109 IPO11Q9UI26 975 aaKnown RBP14.75□□□□□ -0.05
SEC13-208ENST00000397109 MRFAP1Q9Y605 127 aa14.75□□□□□ -0.05
SEC13-208ENST00000397109 TPRP12270 2363 aaKnown RBP14.74□□□□□ -0.05
SEC13-208ENST00000397109 H0Y8X5 98 aa14.74□□□□□ -0.05
SEC13-208ENST00000397109 NEMP1O14524 444 aa14.74□□□□□ -0.05
SEC13-208ENST00000397109 SLC31A1O15431 190 aa14.74□□□□□ -0.05
SEC13-208ENST00000397109 PCDHGA12O60330 932 aa14.74□□□□□ -0.05
SEC13-208ENST00000397109 KRT7P08729 469 aa14.74□□□□□ -0.05
SEC13-208ENST00000397109 PMLP29590 882 aa14.74□□□□□ -0.05
SEC13-208ENST00000397109 MAN1A1P33908 653 aa14.74□□□□□ -0.05
SEC13-208ENST00000397109 CSNK1DP48730 415 aa14.74□□□□□ -0.05
SEC13-208ENST00000397109 RENBPP51606 427 aa14.74□□□□□ -0.05
SEC13-208ENST00000397109 SUOXP51687 545 aa14.74□□□□□ -0.05
SEC13-208ENST00000397109 NXPH1P58417 271 aa14.74□□□□□ -0.05
SEC13-208ENST00000397109 INAVAQ3KP66 663 aa14.74□□□□□ -0.05
SEC13-208ENST00000397109 TMEM259Q4ZIN3 620 aa14.74□□□□□ -0.05
SEC13-208ENST00000397109 LRRC49Q8IUZ0 686 aa14.74□□□□□ -0.05
SEC13-208ENST00000397109 MAP7D3Q8IWC1 876 aa14.74□□□□□ -0.05
SEC13-208ENST00000397109 SLC35G2Q8TBE7 412 aa14.74□□□□□ -0.05
SEC13-208ENST00000397109 FAM71BQ8TC56 605 aa14.74□□□□□ -0.05
SEC13-208ENST00000397109 SETD7Q8WTS6 366 aaKnown RBP14.74□□□□□ -0.05
SEC13-208ENST00000397109 UBE2Q2Q8WVN8 375 aa14.74□□□□□ -0.05
SEC13-208ENST00000397109 TSC1Q92574 1164 aa14.74□□□□□ -0.05
SEC13-208ENST00000397109 TUBGCP5Q96RT8 1024 aa14.74□□□□□ -0.05
SEC13-208ENST00000397109 LACRTQ9GZZ8 138 aa14.74□□□□□ -0.05
SEC13-208ENST00000397109 GUCA1BQ9UMX6 200 aa14.74□□□□□ -0.05
SEC13-208ENST00000397109 ZFR2Q9UPR6 939 aaKnown RBP14.74□□□□□ -0.05
SEC13-208ENST00000397109 TMEM131Q92545 1883 aa14.73□□□□□ -0.05
SEC13-208ENST00000397109 A0A1B0GTQ1 180 aa14.73□□□□□ -0.05
SEC13-208ENST00000397109 EFCAB8A8MWE9 144 aa14.73□□□□□ -0.05
SEC13-208ENST00000397109 KCNK3O14649 394 aa14.73□□□□□ -0.05
SEC13-208ENST00000397109 PRLRP16471 622 aa14.73□□□□□ -0.05
SEC13-208ENST00000397109 SIM1P81133 766 aaPredicted RBP14.73□□□□□ -0.05
SEC13-208ENST00000397109 NSUN2Q08J23 767 aaKnown RBP eCLIP14.73□□□□□ -0.05
SEC13-208ENST00000397109 PDK2Q15119 407 aa14.73□□□□□ -0.05
SEC13-208ENST00000397109 TRIP6Q15654 476 aaKnown RBP14.73□□□□□ -0.05
SEC13-208ENST00000397109 TTC7BQ86TV6 843 aa14.73□□□□□ -0.05
SEC13-208ENST00000397109 SLC35F6Q8N357 371 aa14.73□□□□□ -0.05
SEC13-208ENST00000397109 CEP112Q8N8E3 955 aa14.73□□□□□ -0.05
SEC13-208ENST00000397109 TMEM145Q8NBT3 493 aa14.73□□□□□ -0.05
SEC13-208ENST00000397109 NETO2Q8NC67 525 aa14.73□□□□□ -0.05
SEC13-208ENST00000397109 ASB12Q8WXK4 309 aa14.73□□□□□ -0.05
SEC13-208ENST00000397109 KLK6Q92876 244 aa14.73□□□□□ -0.05
SEC13-208ENST00000397109 KLHDC7BQ96G42 594 aa14.73□□□□□ -0.05
SEC13-208ENST00000397109 ZNF641Q96N77 438 aaPredicted RBP14.73□□□□□ -0.05
SEC13-208ENST00000397109 CDC6Q99741 560 aa14.73□□□□□ -0.05
SEC13-208ENST00000397109 CINPQ9BW66 212 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms