RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 CDT1Q9H211 546 aa4.33□□□□□ -1.72
CMC1-202ENST00000396610 UBN1Q9NPG3 1134 aa4.33□□□□□ -1.72
CMC1-202ENST00000396610 BABAM1Q9NWV8 329 aa4.33□□□□□ -1.72
CMC1-202ENST00000396610 ANKRD10Q9NXR5 420 aa4.33□□□□□ -1.72
CMC1-202ENST00000396610 HCN3Q9P1Z3 774 aa4.33□□□□□ -1.72
CMC1-202ENST00000396610 A0A0U1RQF3 1178 aa4.32□□□□□ -1.72
CMC1-202ENST00000396610 TIMM23O14925 209 aa4.32□□□□□ -1.72
CMC1-202ENST00000396610 KCNAB3O43448 404 aa4.32□□□□□ -1.72
CMC1-202ENST00000396610 F9P00740 461 aa4.32□□□□□ -1.72
CMC1-202ENST00000396610 CBSLP0DN79 551 aa4.32□□□□□ -1.72
CMC1-202ENST00000396610 NAGAP17050 411 aa4.32□□□□□ -1.72
CMC1-202ENST00000396610 ZNF8P17098 575 aaPredicted RBP4.32□□□□□ -1.72
CMC1-202ENST00000396610 PTPN2P17706 415 aa4.32□□□□□ -1.72
CMC1-202ENST00000396610 FMO4P31512 558 aa4.32□□□□□ -1.72
CMC1-202ENST00000396610 CBSP35520 551 aa4.32□□□□□ -1.72
CMC1-202ENST00000396610 PCYT1AP49585 367 aa4.32□□□□□ -1.72
CMC1-202ENST00000396610 UFM1P61960 85 aa4.32□□□□□ -1.72
CMC1-202ENST00000396610 CYP4A11Q02928 519 aa4.32□□□□□ -1.72
CMC1-202ENST00000396610 CAMK1Q14012 370 aa4.32□□□□□ -1.72
CMC1-202ENST00000396610 SHBQ15464 509 aa4.32□□□□□ -1.72
CMC1-202ENST00000396610 BAK1Q16611 211 aa4.32□□□□□ -1.72
CMC1-202ENST00000396610 PRICKLE4Q2TBC4 344 aa4.32□□□□□ -1.72
CMC1-202ENST00000396610 ESCO2Q56NI9 601 aa4.32□□□□□ -1.72
CMC1-202ENST00000396610 PRAMEF19Q5SWL8 479 aa4.32□□□□□ -1.72
CMC1-202ENST00000396610 H1FNTQ75WM6 255 aaPredicted RBP4.32□□□□□ -1.72
CMC1-202ENST00000396610 MB21D2Q8IYB1 491 aaPredicted RBP4.32□□□□□ -1.72
CMC1-202ENST00000396610 CCDC105Q8IYK2 499 aa4.32□□□□□ -1.72
CMC1-202ENST00000396610 TCP11L2Q8N4U5 519 aa4.32□□□□□ -1.72
CMC1-202ENST00000396610 GJC3Q8NFK1 279 aa4.32□□□□□ -1.72
CMC1-202ENST00000396610 ARRDC2Q8TBH0 407 aa4.32□□□□□ -1.72
CMC1-202ENST00000396610 RRP36Q96EU6 259 aaKnown RBP4.32□□□□□ -1.72
CMC1-202ENST00000396610 ZC3HAV1LQ96H79 300 aaKnown RBP4.32□□□□□ -1.72
CMC1-202ENST00000396610 TMEM51Q9NW97 253 aa4.32□□□□□ -1.72
CMC1-202ENST00000396610 HIF1ANQ9NWT6 349 aa4.32□□□□□ -1.72
CMC1-202ENST00000396610 NDRG3Q9UGV2 375 aa4.32□□□□□ -1.72
CMC1-202ENST00000396610 PGAP2Q9UHJ9 254 aa4.32□□□□□ -1.72
CMC1-202ENST00000396610 LACTBL1A8MY62 500 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 KLRF2D3W0D1 207 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 TSPAN4O14817 238 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 RGS11O94810 467 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 NGFRP08138 427 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 PLA2G2AP14555 144 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 ITGB8P26012 769 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 HOXD3P31249 432 aaPredicted RBP4.31□□□□□ -1.72
CMC1-202ENST00000396610 MLH1P40692 756 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 PAFAH1B1P43034 410 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 NR1H2P55055 460 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 CRYZQ08257 329 aaKnown RBP4.31□□□□□ -1.72
CMC1-202ENST00000396610 VEPH1Q14D04 833 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 TAF11Q15544 211 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 SLC4A8Q2Y0W8 1093 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 SLC9B1Q4ZJI4 515 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 FAM69AQ5T7M9 428 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 ZNF517Q6ZMY9 492 aaPredicted RBP4.31□□□□□ -1.72
CMC1-202ENST00000396610 MMS22LQ6ZRQ5 1243 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 RRM2BQ7LG56 351 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 BHLHA9Q7RTU4 235 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 SFTPA2Q8IWL1 248 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 PARP16Q8N5Y8 322 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 IL17REQ8NFR9 667 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 ZCCHC10Q8TBK6 192 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 NOC3LQ8WTT2 800 aaKnown RBP4.31□□□□□ -1.72
CMC1-202ENST00000396610 ZUFSPQ96AP4 578 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 KLHL29Q96CT2 875 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 LYZL4Q96KX0 146 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 MARK4Q96L34 752 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 KLHL15Q96M94 604 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 POLR3GLQ9BT43 218 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 PAIP1Q9H074 479 aaKnown RBP4.31□□□□□ -1.72
CMC1-202ENST00000396610 SARDHQ9UL12 918 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 CARD8Q9Y2G2 431 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 CYP46A1Q9Y6A2 500 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 A3GALT2U3KPV4 340 aa4.31□□□□□ -1.72
CMC1-202ENST00000396610 IGHV4-28A0A0C4DH34 117 aa4.3□□□□□ -1.72
CMC1-202ENST00000396610 ASAP2O43150 1006 aa4.3□□□□□ -1.72
CMC1-202ENST00000396610 TNFSF14O43557 240 aa4.3□□□□□ -1.72
CMC1-202ENST00000396610 KLK8O60259 260 aa4.3□□□□□ -1.72
CMC1-202ENST00000396610 HEXAP06865 529 aa4.3□□□□□ -1.72
CMC1-202ENST00000396610 ACAA1P09110 424 aaPredicted RBP4.3□□□□□ -1.72
CMC1-202ENST00000396610 PCNAP12004 261 aa4.3□□□□□ -1.72
CMC1-202ENST00000396610 ATP1A3P13637 1013 aa4.3□□□□□ -1.72
CMC1-202ENST00000396610 COX7A2P14406 83 aa4.3□□□□□ -1.72
CMC1-202ENST00000396610 MYF6P23409 242 aa4.3□□□□□ -1.72
CMC1-202ENST00000396610 AMTP48728 403 aa4.3□□□□□ -1.72
CMC1-202ENST00000396610 HDAC4P56524 1084 aa4.3□□□□□ -1.72
CMC1-202ENST00000396610 GRIK3Q13003 919 aa4.3□□□□□ -1.72
CMC1-202ENST00000396610 C8orf82Q6P1X6 216 aaPredicted RBP4.3□□□□□ -1.72
CMC1-202ENST00000396610 NOXA1Q86UR1 476 aa4.3□□□□□ -1.72
CMC1-202ENST00000396610 CERS3Q8IU89 383 aa4.3□□□□□ -1.72
CMC1-202ENST00000396610 DHX40Q8IX18 779 aaKnown RBP4.3□□□□□ -1.72
CMC1-202ENST00000396610 C11orf65Q8NCR3 313 aa4.3□□□□□ -1.72
CMC1-202ENST00000396610 OR14A16Q8NHC5 309 aa4.3□□□□□ -1.72
CMC1-202ENST00000396610 NEUROG1Q92886 237 aa4.3□□□□□ -1.72
CMC1-202ENST00000396610 ERGIC1Q969X5 290 aa4.3□□□□□ -1.72
CMC1-202ENST00000396610 TXNDC15Q96J42 360 aa4.3□□□□□ -1.72
CMC1-202ENST00000396610 BBS4Q96RK4 519 aa4.3□□□□□ -1.72
CMC1-202ENST00000396610 SIN3AQ96ST3 1273 aa4.3□□□□□ -1.72
CMC1-202ENST00000396610 SEC62Q99442 399 aaKnown RBP4.3□□□□□ -1.72
CMC1-202ENST00000396610 MXRA8Q9BRK3 442 aa4.3□□□□□ -1.72
CMC1-202ENST00000396610 TMEM204Q9BSN7 226 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms