RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 BHLHE41Q9C0J9 482 aaPredicted RBP14.08□□□□□ -0.16
COL4A3-202ENST00000396578 MGAT4AQ9UM21 535 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 PRPF19Q9UMS4 504 aaKnown RBP14.08□□□□□ -0.16
COL4A3-202ENST00000396578 PCDHB5Q9Y5E4 795 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 FGF10O15520 208 aaPredicted RBP14.08□□□□□ -0.16
COL4A3-202ENST00000396578 ZMPSTE24O75844 475 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 KRT36O76013 467 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 ARP10275 920 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 SLC6A3Q01959 620 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 GCNT1Q02742 428 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 GALNT3Q14435 633 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 KCNA10Q16322 511 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 RUNDC3AQ59EK9 446 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 OAFQ86UD1 273 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 ACMSDQ8TDX5 336 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 PCDH12Q9NPG4 1184 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 PCDHB12Q9Y5F1 795 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 GPR75-ASB3A0A0A6YYF3 556 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 CASKO14936 926 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 PCID2Q5JVF3 399 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 STXBP5Q5T5C0 1151 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 LYPLAL1Q5VWZ2 237 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 GALNT18Q6P9A2 607 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 TRIM40Q6P9F5 258 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 TKTL2Q9H0I9 626 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 ATXN3LQ9H3M9 355 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 OR10H2O60403 315 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 TTPAP49638 278 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 GRB14Q14449 540 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 BRINP3Q76B58 766 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 PARP8Q8N3A8 854 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 ZNF248Q8NDW4 579 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 GMCL1Q96IK5 515 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 ELOVL4Q9GZR5 314 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 SNTG2Q9NY99 539 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 NR2F6P10588 404 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 EIF2S3P41091 472 aaKnown RBP14.07□□□□□ -0.16
COL4A3-202ENST00000396578 C3orf67Q6ZVT6 689 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 ADAM32Q8TC27 787 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 LENG9Q96B70 501 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 CERS2Q96G23 380 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.07□□□□□ -0.16
COL4A3-202ENST00000396578 MAGEC1O60732 1142 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 TEFMQ96QE5 360 aaKnown RBP14.07□□□□□ -0.16
COL4A3-202ENST00000396578 ZNF286BP0CG31 522 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 PSMB4P28070 264 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 SERPINA4P29622 427 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 CDK9P50750 372 aaKnown RBP14.07□□□□□ -0.16
COL4A3-202ENST00000396578 PEX5LQ8IYB4 626 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.07□□□□□ -0.16
COL4A3-202ENST00000396578 TSEN2Q8NCE0 465 aaKnown RBP14.07□□□□□ -0.16
COL4A3-202ENST00000396578 BAIAP2Q9UQB8 552 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 ENTPD5O75356 428 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 SERPINB7O75635 380 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 CYP4B1P13584 511 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 PTPN1P18031 435 aaKnown RBP14.07□□□□□ -0.16
COL4A3-202ENST00000396578 ATP5F1P24539 256 aaPredicted RBP14.07□□□□□ -0.16
COL4A3-202ENST00000396578 NAGLUP54802 743 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 DLG4P78352 724 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 ELAVL2Q12926 359 aaKnown RBP14.07□□□□□ -0.16
COL4A3-202ENST00000396578 SULT1C3Q6IMI6 304 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 NEPROQ6NW34 567 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 DOK6Q6PKX4 331 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 LRRIQ1Q96JM4 1722 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 CCNKO75909 580 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 SHBGP04278 402 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 ALDH3A2P51648 485 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 MYBPC3Q14896 1274 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 PIK3R6Q5UE93 754 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 FBXO33Q7Z6M2 555 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 RDH11Q8TC12 318 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 HTRA1Q92743 480 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 AP4B1Q9Y6B7 739 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 A0A0A0MRY4 1105 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 SRRM3A6NNA2 597 aaPredicted RBP14.07□□□□□ -0.16
COL4A3-202ENST00000396578 TRIM3O75382 744 aaPredicted RBP14.07□□□□□ -0.16
COL4A3-202ENST00000396578 C9P02748 559 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 USP17L7P0C7H9 530 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 ETS2P15036 469 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 KDELR1P24390 212 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 RBL1P28749 1068 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 SDC2P34741 201 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 PLET1Q6UQ28 207 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 BRSK2Q8IWQ3 736 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 ANKRD13AQ8IZ07 590 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 SPATA13Q96N96 652 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 PCYOX1Q9UHG3 505 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 NCKAP1Q9Y2A7 1128 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 RBMXL2O75526 392 aaKnown RBP14.07□□□□□ -0.16
COL4A3-202ENST00000396578 TFRCP02786 760 aaKnown RBP14.07□□□□□ -0.16
COL4A3-202ENST00000396578 BUD31P41223 144 aaPredicted RBP14.07□□□□□ -0.16
COL4A3-202ENST00000396578 LGI2Q8N0V4 545 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 CCDC115Q96NT0 180 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 POPDC2Q9HBU9 364 aa14.07□□□□□ -0.16
COL4A3-202ENST00000396578 ZNF214Q9UL59 606 aaPredicted RBP14.07□□□□□ -0.16
COL4A3-202ENST00000396578 UGT2B11O75310 529 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 FBXO16Q8IX29 292 aaPredicted RBP14.06□□□□□ -0.16
COL4A3-202ENST00000396578 MROH8Q9H579 483 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 UXTQ9UBK9 157 aaPredicted RBP14.06□□□□□ -0.16
COL4A3-202ENST00000396578 ULK1O75385 1050 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms