RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 PRPSAP2O60256 369 aa18.52■□□□□ 0.56
FXN-203ENST00000396366 PRAMEF11O60813 436 aa18.52■□□□□ 0.56
FXN-203ENST00000396366 LRCH4O75427 683 aa18.52■□□□□ 0.56
FXN-203ENST00000396366 NEBLO76041 1014 aa18.52■□□□□ 0.56
FXN-203ENST00000396366 C1SP09871 688 aa18.52■□□□□ 0.56
FXN-203ENST00000396366 JUPP14923 745 aa18.52■□□□□ 0.56
FXN-203ENST00000396366 ERCC2P18074 760 aa18.52■□□□□ 0.56
FXN-203ENST00000396366 RGRP47804 291 aa18.52■□□□□ 0.56
FXN-203ENST00000396366 NDST2P52849 883 aa18.52■□□□□ 0.56
FXN-203ENST00000396366 SEMG2Q02383 582 aa18.52■□□□□ 0.56
FXN-203ENST00000396366 ZNF211Q13398 564 aaPredicted RBP18.52■□□□□ 0.56
FXN-203ENST00000396366 KLHL40Q2TBA0 621 aa18.52■□□□□ 0.56
FXN-203ENST00000396366 FIGNQ5HY92 759 aa18.52■□□□□ 0.56
FXN-203ENST00000396366 KYAT3Q6YP21 454 aaKnown RBP18.52■□□□□ 0.56
FXN-203ENST00000396366 VPS36Q86VN1 386 aa18.52■□□□□ 0.56
FXN-203ENST00000396366 TMPRSS12Q86WS5 348 aa18.52■□□□□ 0.56
FXN-203ENST00000396366 ARHGAP12Q8IWW6 846 aa18.52■□□□□ 0.56
FXN-203ENST00000396366 NPWQ8N729 165 aa18.52■□□□□ 0.56
FXN-203ENST00000396366 CENPTQ96BT3 561 aa18.52■□□□□ 0.56
FXN-203ENST00000396366 CWC15Q9P013 229 aaKnown RBP18.52■□□□□ 0.56
FXN-203ENST00000396366 MYLKQ15746 1914 aa18.52■□□□□ 0.56
FXN-203ENST00000396366 APC2O95996 2303 aa18.51■□□□□ 0.55
FXN-203ENST00000396366 LRRK1Q38SD2 2015 aa18.51■□□□□ 0.55
FXN-203ENST00000396366 SPTY2D1-AS1A0A0U1RR47 76 aa18.51■□□□□ 0.55
FXN-203ENST00000396366 IL1R2P27930 398 aa18.51■□□□□ 0.55
FXN-203ENST00000396366 HTR7P34969 479 aa18.51■□□□□ 0.55
FXN-203ENST00000396366 UBASH3AP57075 661 aa18.51■□□□□ 0.55
FXN-203ENST00000396366 RAD51Q06609 339 aa18.51■□□□□ 0.55
FXN-203ENST00000396366 TARDBPQ13148 414 aaKnown RBP eCLIP18.51■□□□□ 0.55
FXN-203ENST00000396366 PDE1CQ14123 709 aaPredicted RBP18.51■□□□□ 0.55
FXN-203ENST00000396366 AFMIDQ63HM1 303 aa18.51■□□□□ 0.55
FXN-203ENST00000396366 CAMK1DQ8IU85 385 aa18.51■□□□□ 0.55
FXN-203ENST00000396366 OR4C6Q8NH72 309 aa18.51■□□□□ 0.55
FXN-203ENST00000396366 FNIP1Q8TF40 1166 aa18.51■□□□□ 0.55
FXN-203ENST00000396366 ASB12Q8WXK4 309 aa18.51■□□□□ 0.55
FXN-203ENST00000396366 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.51■□□□□ 0.55
FXN-203ENST00000396366 CPEB1Q9BZB8 566 aaKnown RBP18.51■□□□□ 0.55
FXN-203ENST00000396366 MBNL1Q9NR56 388 aaKnown RBP18.51■□□□□ 0.55
FXN-203ENST00000396366 IPO11Q9UI26 975 aaKnown RBP18.51■□□□□ 0.55
FXN-203ENST00000396366 PNMA8BQ9ULN7 279 aaPredicted RBP18.51■□□□□ 0.55
FXN-203ENST00000396366 RAXQ9Y2V3 346 aa18.51■□□□□ 0.55
FXN-203ENST00000396366 DFFAO00273 331 aa18.5■□□□□ 0.55
FXN-203ENST00000396366 PRKCGP05129 697 aa18.5■□□□□ 0.55
FXN-203ENST00000396366 ACP1P24666 158 aa18.5■□□□□ 0.55
FXN-203ENST00000396366 RABIFP47224 123 aa18.5■□□□□ 0.55
FXN-203ENST00000396366 PFN3P60673 137 aa18.5■□□□□ 0.55
FXN-203ENST00000396366 EIF2B5Q13144 721 aaKnown RBP18.5■□□□□ 0.55
FXN-203ENST00000396366 SMTNL2Q2TAL5 461 aa18.5■□□□□ 0.55
FXN-203ENST00000396366 HES3Q5TGS1 186 aa18.5■□□□□ 0.55
FXN-203ENST00000396366 C19orf48Q6RUI8 117 aa18.5■□□□□ 0.55
FXN-203ENST00000396366 ZSWIM9Q86XI8 627 aa18.5■□□□□ 0.55
FXN-203ENST00000396366 DCP2Q8IU60 420 aaKnown RBP18.5■□□□□ 0.55
FXN-203ENST00000396366 PDCD7Q8N8D1 485 aaKnown RBP18.5■□□□□ 0.55
FXN-203ENST00000396366 TSEN2Q8NCE0 465 aaKnown RBP18.5■□□□□ 0.55
FXN-203ENST00000396366 FAM174AQ8TBP5 190 aa18.5■□□□□ 0.55
FXN-203ENST00000396366 ARHGEF26Q96DR7 871 aa18.5■□□□□ 0.55
FXN-203ENST00000396366 IFT43Q96FT9 208 aa18.5■□□□□ 0.55
FXN-203ENST00000396366 BTBD6Q96KE9 485 aa18.5■□□□□ 0.55
FXN-203ENST00000396366 NCAPGQ9BPX3 1015 aa18.5■□□□□ 0.55
FXN-203ENST00000396366 TCEAL2Q9H3H9 227 aaPredicted RBP18.5■□□□□ 0.55
FXN-203ENST00000396366 SUV39H2Q9H5I1 410 aa18.5■□□□□ 0.55
FXN-203ENST00000396366 DKK3Q9UBP4 350 aa18.5■□□□□ 0.55
FXN-203ENST00000396366 COQ6Q9Y2Z9 468 aa18.5■□□□□ 0.55
FXN-203ENST00000396366 SCINQ9Y6U3 715 aa18.5■□□□□ 0.55
FXN-203ENST00000396366 A0A1W2PQJ5 194 aa18.49■□□□□ 0.55
FXN-203ENST00000396366 ARHGAP42A6NI28 874 aa18.49■□□□□ 0.55
FXN-203ENST00000396366 PALMO75781 387 aa18.49■□□□□ 0.55
FXN-203ENST00000396366 TM7SF2O76062 418 aa18.49■□□□□ 0.55
FXN-203ENST00000396366 CSF2P04141 144 aa18.49■□□□□ 0.55
FXN-203ENST00000396366 MYBL1P10243 752 aa18.49■□□□□ 0.55
FXN-203ENST00000396366 IGFALSP35858 605 aa18.49■□□□□ 0.55
FXN-203ENST00000396366 DAB2P98082 770 aa18.49■□□□□ 0.55
FXN-203ENST00000396366 DPYSQ14117 519 aa18.49■□□□□ 0.55
FXN-203ENST00000396366 TMEM52BQ4KMG9 183 aa18.49■□□□□ 0.55
FXN-203ENST00000396366 TDRD12Q587J7 1177 aaKnown RBP18.49■□□□□ 0.55
FXN-203ENST00000396366 TXNRD3NBQ6F5E7 133 aa18.49■□□□□ 0.55
FXN-203ENST00000396366 SRLQ86TD4 932 aa18.49■□□□□ 0.55
FXN-203ENST00000396366 ZNF548Q8NEK5 533 aaPredicted RBP18.49■□□□□ 0.55
FXN-203ENST00000396366 CXorf40AQ8TE69 158 aa18.49■□□□□ 0.55
FXN-203ENST00000396366 NSMCE3Q96MG7 304 aa18.49■□□□□ 0.55
FXN-203ENST00000396366 THAP2Q9H0W7 228 aa18.49■□□□□ 0.55
FXN-203ENST00000396366 ZWILCHQ9H900 591 aa18.49■□□□□ 0.55
FXN-203ENST00000396366 MRPL47Q9HD33 250 aaKnown RBP18.49■□□□□ 0.55
FXN-203ENST00000396366 ETNK2Q9NVF9 386 aa18.49■□□□□ 0.55
FXN-203ENST00000396366 ACACAQ13085 2346 aa18.48■□□□□ 0.55
FXN-203ENST00000396366 A0A087X0T9 212 aa18.48■□□□□ 0.55
FXN-203ENST00000396366 LY6G6EA0A0G2JKS1 128 aa18.48■□□□□ 0.55
FXN-203ENST00000396366 TTC24A2A3L6 582 aaPredicted RBP18.48■□□□□ 0.55
FXN-203ENST00000396366 EIF3CLB5ME19 914 aaKnown RBP18.48■□□□□ 0.55
FXN-203ENST00000396366 K7ESM1 405 aa18.48■□□□□ 0.55
FXN-203ENST00000396366 SCAMP1O15126 338 aa18.48■□□□□ 0.55
FXN-203ENST00000396366 MUSKO15146 869 aa18.48■□□□□ 0.55
FXN-203ENST00000396366 FAM228BP0C875 321 aa18.48■□□□□ 0.55
FXN-203ENST00000396366 NME1P15531 152 aaKnown RBP18.48■□□□□ 0.55
FXN-203ENST00000396366 AMPD1P23109 780 aa18.48■□□□□ 0.55
FXN-203ENST00000396366 HCAR3P49019 387 aa18.48■□□□□ 0.55
FXN-203ENST00000396366 HNRNPKP61978 463 aaKnown RBP eCLIP18.48■□□□□ 0.55
FXN-203ENST00000396366 TPM4P67936 248 aa18.48■□□□□ 0.55
FXN-203ENST00000396366 INSM1Q01101 510 aaPredicted RBP18.48■□□□□ 0.55
FXN-203ENST00000396366 UGP2Q16851 508 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms