RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 MRPL57Q9BQC6 102 aaKnown RBP16.95■□□□□ 0.3
NUP50-202ENST00000396096 TMEM175Q9BSA9 504 aa16.95■□□□□ 0.3
NUP50-202ENST00000396096 TTLL2Q9BWV7 592 aa16.95■□□□□ 0.3
NUP50-202ENST00000396096 MRPL46Q9H2W6 279 aaKnown RBP16.95■□□□□ 0.3
NUP50-202ENST00000396096 RETREG1Q9H6L5 497 aa16.95■□□□□ 0.3
NUP50-202ENST00000396096 XPR1Q9UBH6 696 aa16.95■□□□□ 0.3
NUP50-202ENST00000396096 SLC27A5Q9Y2P5 690 aa16.95■□□□□ 0.3
NUP50-202ENST00000396096 HDAC3O15379 428 aa16.94■□□□□ 0.3
NUP50-202ENST00000396096 GNRH1P01148 92 aa16.94■□□□□ 0.3
NUP50-202ENST00000396096 RPSAP08865 295 aaKnown RBP16.94■□□□□ 0.3
NUP50-202ENST00000396096 MPSTP25325 297 aa16.94■□□□□ 0.3
NUP50-202ENST00000396096 DNAJB13P59910 316 aa16.94■□□□□ 0.3
NUP50-202ENST00000396096 MAXP61244 160 aa16.94■□□□□ 0.3
NUP50-202ENST00000396096 MXRA7P84157 204 aa16.94■□□□□ 0.3
NUP50-202ENST00000396096 ILF2Q12905 390 aaKnown RBP16.94■□□□□ 0.3
NUP50-202ENST00000396096 BFSP2Q13515 415 aa16.94■□□□□ 0.3
NUP50-202ENST00000396096 BTG3Q14201 252 aaPredicted RBP16.94■□□□□ 0.3
NUP50-202ENST00000396096 MGAT5BQ3V5L5 792 aa16.94■□□□□ 0.3
NUP50-202ENST00000396096 C6orf163Q5TEZ5 329 aa16.94■□□□□ 0.3
NUP50-202ENST00000396096 LMNTD2Q8IXW0 634 aa16.94■□□□□ 0.3
NUP50-202ENST00000396096 CRIPAKQ8N1N5 446 aa16.94■□□□□ 0.3
NUP50-202ENST00000396096 PGBD5Q8N414 524 aa16.94■□□□□ 0.3
NUP50-202ENST00000396096 MAB21L3Q8N8X9 362 aa16.94■□□□□ 0.3
NUP50-202ENST00000396096 OR13J1Q8NGT2 312 aa16.94■□□□□ 0.3
NUP50-202ENST00000396096 STMN2Q93045 179 aa16.94■□□□□ 0.3
NUP50-202ENST00000396096 CEP295NLQ96MC4 621 aa16.94■□□□□ 0.3
NUP50-202ENST00000396096 OMDQ99983 421 aa16.94■□□□□ 0.3
NUP50-202ENST00000396096 THTPAQ9BU02 230 aa16.94■□□□□ 0.3
NUP50-202ENST00000396096 VTI1BQ9UEU0 232 aa16.94■□□□□ 0.3
NUP50-202ENST00000396096 SLC7A8Q9UHI5 535 aa16.94■□□□□ 0.3
NUP50-202ENST00000396096 A0A088AWK7 358 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 HOXA2O43364 376 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 NPHS1O60500 1241 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 PRAMEF11O60813 436 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 PIGNO95427 931 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 INHAP05111 366 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 CHRNGP07510 517 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 ATXN1LP0C7T5 689 aaKnown RBP16.93■□□□□ 0.3
NUP50-202ENST00000396096 SERPINB5P36952 375 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 PBX3P40426 434 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 GLRBP48167 497 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 GATMP50440 423 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 PGGT1BP53609 377 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 ARPP19P56211 112 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 ACTR3P61158 418 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 SLC34A1Q06495 639 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 ITKQ08881 620 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 ZNF460Q14592 562 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 ARL13AQ5H913 290 aaPredicted RBP16.93■□□□□ 0.3
NUP50-202ENST00000396096 NADSYN1Q6IA69 706 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 ANKS3Q6ZW76 656 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 TMC7Q7Z402 723 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 LSMEM2Q8N112 164 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 RPRD1AQ96P16 312 aaPredicted RBP16.93■□□□□ 0.3
NUP50-202ENST00000396096 SEPT5Q99719 369 aaPredicted RBP16.93■□□□□ 0.3
NUP50-202ENST00000396096 MFSD1Q9H3U5 465 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 YY1AP1Q9H869 796 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 HMX1Q9NP08 348 aaPredicted RBP16.93■□□□□ 0.3
NUP50-202ENST00000396096 TCF7L2Q9NQB0 619 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 SLC22A2O15244 555 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 NCF2P19878 526 aaPredicted RBP16.93■□□□□ 0.3
NUP50-202ENST00000396096 TACR2P21452 398 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 NAGLUP54802 743 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 SLC12A2P55011 1212 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 BTKQ06187 659 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 LBRQ14739 615 aaKnown RBP16.93■□□□□ 0.3
NUP50-202ENST00000396096 TAF11Q15544 211 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 SIRPB2Q5JXA9 342 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 RTP2Q5QGT7 225 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 TMCO4Q5TGY1 634 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 SEL1L3Q68CR1 1132 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 CNSTQ6PJW8 725 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 NPAS4Q8IUM7 802 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 GPATCH11Q8N954 259 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 SEPT8Q92599 483 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 PEX13Q92968 403 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 TSPAN17Q96FV3 270 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 CNDP1Q96KN2 507 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 ZNF599Q96NL3 588 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 PANX3Q96QZ0 392 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 CDK5RAP1Q96SZ6 601 aaKnown RBP16.93■□□□□ 0.3
NUP50-202ENST00000396096 MRPL9Q9BYD2 267 aaKnown RBP16.93■□□□□ 0.3
NUP50-202ENST00000396096 GPAMQ9HCL2 828 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 IGSF5Q9NSI5 407 aa16.93■□□□□ 0.3
NUP50-202ENST00000396096 SLC38A8A6NNN8 435 aa16.92■□□□□ 0.3
NUP50-202ENST00000396096 MEI4A8MW99 385 aa16.92■□□□□ 0.3
NUP50-202ENST00000396096 GRID2O43424 1007 aa16.92■□□□□ 0.3
NUP50-202ENST00000396096 ZBTB14O43829 449 aa16.92■□□□□ 0.3
NUP50-202ENST00000396096 CCNT2O60583 730 aaKnown RBP16.92■□□□□ 0.3
NUP50-202ENST00000396096 EPOP01588 193 aa16.92■□□□□ 0.3
NUP50-202ENST00000396096 TFEBP19484 476 aa16.92■□□□□ 0.3
NUP50-202ENST00000396096 VHLP40337 213 aa16.92■□□□□ 0.3
NUP50-202ENST00000396096 ACVR1Q04771 509 aa16.92■□□□□ 0.3
NUP50-202ENST00000396096 KLF10Q13118 480 aa16.92■□□□□ 0.3
NUP50-202ENST00000396096 LAMB3Q13751 1172 aa16.92■□□□□ 0.3
NUP50-202ENST00000396096 CCDC6Q16204 474 aa16.92■□□□□ 0.3
NUP50-202ENST00000396096 ALG1LQ6GMV1 187 aa16.92■□□□□ 0.3
NUP50-202ENST00000396096 RIPOR1Q6ZS17 1223 aa16.92■□□□□ 0.3
NUP50-202ENST00000396096 MYLK4Q86YV6 388 aaPredicted RBP16.92■□□□□ 0.3
NUP50-202ENST00000396096 CILP2Q8IUL8 1156 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms