RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 SIRPB2Q5JXA9 342 aa20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 UNC5AQ6ZN44 842 aa20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 PCDH20Q8N6Y1 951 aaKnown RBP20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 GOLGA6L1Q8N7Z2 621 aa20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 TRIM56Q9BRZ2 755 aaKnown RBP20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 TDRD1Q9BXT4 1180 aaKnown RBP20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 EVLQ9UI08 416 aaPredicted RBP20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 SLC8A2Q9UPR5 921 aa20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 CHKBQ9Y259 395 aa20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 ARIH1Q9Y4X5 557 aaPredicted RBP20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 PCDHGC4Q9Y5F7 938 aa20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 RAI2Q9Y5P3 530 aa20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 MAGEB16A2A368 324 aa20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 ARNTLO00327 626 aa20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 BNIP3LO60238 219 aa20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 DLDP09622 509 aaKnown RBP20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 ATXN1LP0C7T5 689 aaKnown RBP20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 CA4P22748 312 aa20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 MAPK8P45983 427 aa20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 MESP2Q0VG99 397 aa20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 GALNT3Q14435 633 aa20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 STAT4Q14765 748 aa20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 OR6K2Q8NGY2 324 aa20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 CSGALNACT1Q8TDX6 532 aa20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 FBF1Q8TES7 1133 aa20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 MRGPRX3Q96LB0 322 aa20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 ELOVL2Q9NXB9 296 aa20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 PRRT4C9JH25 899 aa20.61■□□□□ 0.89
VCPKMT-202ENST00000395860 NDST3O95803 873 aa20.61■□□□□ 0.89
VCPKMT-202ENST00000395860 GSRP00390 522 aa20.61■□□□□ 0.89
VCPKMT-202ENST00000395860 FGF1P05230 155 aa20.61■□□□□ 0.89
VCPKMT-202ENST00000395860 POLBP06746 335 aa20.61■□□□□ 0.89
VCPKMT-202ENST00000395860 EIF2DP41214 584 aaKnown RBP20.61■□□□□ 0.89
VCPKMT-202ENST00000395860 POU6F1Q14863 301 aa20.61■□□□□ 0.89
VCPKMT-202ENST00000395860 AAK1Q2M2I8 961 aa20.61■□□□□ 0.89
VCPKMT-202ENST00000395860 PCID2Q5JVF3 399 aa20.61■□□□□ 0.89
VCPKMT-202ENST00000395860 PLCD3Q8N3E9 789 aa20.61■□□□□ 0.89
VCPKMT-202ENST00000395860 TERB1Q8NA31 727 aa20.61■□□□□ 0.89
VCPKMT-202ENST00000395860 PPHLN1Q8NEY8 458 aaKnown RBP20.61■□□□□ 0.89
VCPKMT-202ENST00000395860 GSDMBQ8TAX9 411 aa20.61■□□□□ 0.89
VCPKMT-202ENST00000395860 PDCD6IPQ8WUM4 868 aaKnown RBP20.61■□□□□ 0.89
VCPKMT-202ENST00000395860 NXPE3Q969Y0 559 aa20.61■□□□□ 0.89
VCPKMT-202ENST00000395860 TRIB3Q96RU7 358 aa20.61■□□□□ 0.89
VCPKMT-202ENST00000395860 PHF7Q9BWX1 381 aaPredicted RBP20.61■□□□□ 0.89
VCPKMT-202ENST00000395860 RABGEF1Q9UJ41 708 aa20.61■□□□□ 0.89
VCPKMT-202ENST00000395860 SOX13Q9UN79 622 aa20.61■□□□□ 0.89
VCPKMT-202ENST00000395860 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.6■□□□□ 0.89
VCPKMT-202ENST00000395860 EXOC1LA0A1B0GW35 172 aa20.6■□□□□ 0.89
VCPKMT-202ENST00000395860 TCRBV9S1A1TA0A576 114 aa20.6■□□□□ 0.89
VCPKMT-202ENST00000395860 GOLGA6L10A6NI86 522 aa20.6■□□□□ 0.89
VCPKMT-202ENST00000395860 TIMM44O43615 452 aa20.6■□□□□ 0.89
VCPKMT-202ENST00000395860 STX2P32856 288 aa20.6■□□□□ 0.89
VCPKMT-202ENST00000395860 ST8SIA6P61647 398 aa20.6■□□□□ 0.89
VCPKMT-202ENST00000395860 TRAF2Q12933 501 aa20.6■□□□□ 0.89
VCPKMT-202ENST00000395860 EIF4HQ15056 248 aaKnown RBP20.6■□□□□ 0.89
VCPKMT-202ENST00000395860 PTPRNQ16849 979 aa20.6■□□□□ 0.89
VCPKMT-202ENST00000395860 KRT71Q3SY84 523 aa20.6■□□□□ 0.89
VCPKMT-202ENST00000395860 PREPLQ4J6C6 727 aaPredicted RBP20.6■□□□□ 0.89
VCPKMT-202ENST00000395860 HSP90B2PQ58FF3 399 aa20.6■□□□□ 0.89
VCPKMT-202ENST00000395860 CARD16Q5EG05 197 aa20.6■□□□□ 0.89
VCPKMT-202ENST00000395860 NAIF1Q69YI7 327 aaPredicted RBP20.6■□□□□ 0.89
VCPKMT-202ENST00000395860 PHTF2Q8N3S3 785 aa20.6■□□□□ 0.89
VCPKMT-202ENST00000395860 RMDN1Q96DB5 314 aa20.6■□□□□ 0.89
VCPKMT-202ENST00000395860 PLA2G4CQ9UP65 541 aa20.6■□□□□ 0.89
VCPKMT-202ENST00000395860 RPS6KL1Q9Y6S9 549 aa20.6■□□□□ 0.89
VCPKMT-202ENST00000395860 FAM237BA0A1B0GVD1 139 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 TBC1D3BA6NDS4 549 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 SMIM23A6NLE4 172 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 RASGRF2O14827 1237 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 IVLP07476 585 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 RECQLP46063 649 aaPredicted RBP20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 VASPP50552 380 aaPredicted RBP20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 BCL2L1Q07817 233 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 LONRF1Q17RB8 773 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 STEAP4Q687X5 459 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 Q6ZVU0 165 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 CROCCP2Q86T23 111 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 EPS8L3Q8TE67 593 aaKnown RBP20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 ZNF669Q96BR6 464 aaPredicted RBP20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 SH3GL2Q99962 352 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 TMEM109Q9BVC6 243 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 ADGRE3Q9BY15 652 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 ROPN1BQ9BZX4 212 aaPredicted RBP20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 ACSS3Q9H6R3 686 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 ROPN1Q9HAT0 212 aaPredicted RBP20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 PLAC1Q9HBJ0 212 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 CHRAC1Q9NRG0 131 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 LIMD1Q9UGP4 676 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 XIRP2A4UGR9 3374 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 MUC22E2RYF6 1773 aaPredicted RBP20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 TLDC2A0PJX2 215 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 USP1O94782 785 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 MYZAPP0CAP1 466 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 RAD51Q06609 339 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 SEPT6Q14141 434 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 CRYMQ14894 314 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 KLHL38Q2WGJ6 581 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 MYLK3Q32MK0 819 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 SPANXN3Q5MJ09 141 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms