RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 LRRC40Q9H9A6 602 aa3.3□□□□□ -1.88
PHF3-202ENST00000393387 UGT1A7Q9HAW7 530 aa3.3□□□□□ -1.88
PHF3-202ENST00000393387 UGT1A10Q9HAW8 530 aa3.3□□□□□ -1.88
PHF3-202ENST00000393387 UGT1A8Q9HAW9 530 aa3.3□□□□□ -1.88
PHF3-202ENST00000393387 C11orf16Q9NQ32 467 aa3.3□□□□□ -1.88
PHF3-202ENST00000393387 TCF7L2Q9NQB0 619 aa3.3□□□□□ -1.88
PHF3-202ENST00000393387 PDGFCQ9NRA1 345 aa3.3□□□□□ -1.88
PHF3-202ENST00000393387 TBCCD1Q9NVR7 557 aa3.3□□□□□ -1.88
PHF3-202ENST00000393387 GSKIPQ9P0R6 139 aa3.3□□□□□ -1.88
PHF3-202ENST00000393387 CXXC1Q9P0U4 656 aaPredicted RBP3.3□□□□□ -1.88
PHF3-202ENST00000393387 PI4KBQ9UBF8 816 aa3.3□□□□□ -1.88
PHF3-202ENST00000393387 ASH2LQ9UBL3 628 aa3.3□□□□□ -1.88
PHF3-202ENST00000393387 SUCOQ9UBS9 1254 aaKnown RBP3.3□□□□□ -1.88
PHF3-202ENST00000393387 KCNN3Q9UGI6 736 aa3.3□□□□□ -1.88
PHF3-202ENST00000393387 OR6C74A6NCV1 312 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 FAM86C2PA6NEL3 165 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 FABP12A6NFH5 140 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 USP17L12C9JPN9 530 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 USP17L21D6R901 530 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 H3BRB1 525 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 PSMD12O00232 456 aaPredicted RBP3.29□□□□□ -1.88
PHF3-202ENST00000393387 DNAJB5O75953 348 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 RASGRP1O95267 797 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 TFRCP02786 760 aaKnown RBP3.29□□□□□ -1.88
PHF3-202ENST00000393387 RALAP11233 206 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 HIBADHP31937 336 aaKnown RBP3.29□□□□□ -1.88
PHF3-202ENST00000393387 MNDAP41218 407 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 FMR1Q06787 632 aaKnown RBP eCLIP3.29□□□□□ -1.88
PHF3-202ENST00000393387 TWF1Q12792 350 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 POU4F3Q15319 338 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 HYAL4Q2M3T9 481 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 Q5PR19 223 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 AKR1C8PQ5T2L2 129 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 AHSA2Q719I0 299 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 ENOSF1Q7L5Y1 443 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 ZNF550Q7Z398 422 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 CCNJLQ8IV13 435 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 CCDC116Q8IYX3 515 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 TTC39CQ8N584 583 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 INO80EQ8NBZ0 244 aaPredicted RBP3.29□□□□□ -1.88
PHF3-202ENST00000393387 MCOLN3Q8TDD5 553 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 OXER1Q8TDS5 423 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 CHTF18Q8WVB6 975 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 HPSE2Q8WWQ2 592 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 RFFLQ8WZ73 363 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 SERPINB12Q96P63 405 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 TBX5Q99593 518 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 GTPBP2Q9BX10 602 aaKnown RBP3.29□□□□□ -1.88
PHF3-202ENST00000393387 ROPN1BQ9BZX4 212 aaPredicted RBP3.29□□□□□ -1.88
PHF3-202ENST00000393387 OSBPL5Q9H0X9 879 aaPredicted RBP3.29□□□□□ -1.88
PHF3-202ENST00000393387 MUC3BQ9H195 1237 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 PPIL3Q9H2H8 161 aaKnown RBP3.29□□□□□ -1.88
PHF3-202ENST00000393387 EBF3Q9H4W6 596 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 EXO5Q9H790 373 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 ROPN1Q9HAT0 212 aaPredicted RBP3.29□□□□□ -1.88
PHF3-202ENST00000393387 RPS10P5Q9NQ39 176 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 ASF1BQ9NVP2 202 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 LYARQ9NX58 379 aaKnown RBP3.29□□□□□ -1.88
PHF3-202ENST00000393387 PAQR5Q9NXK6 330 aaPredicted RBP3.29□□□□□ -1.88
PHF3-202ENST00000393387 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.29□□□□□ -1.88
PHF3-202ENST00000393387 FRMPD4Q14CM0 1322 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 PPIP5K1Q6PFW1 1433 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 DCLK1O15075 740 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 DYNC1LI2O43237 492 aaPredicted RBP3.29□□□□□ -1.88
PHF3-202ENST00000393387 AKAP8O43823 692 aaKnown RBP3.29□□□□□ -1.88
PHF3-202ENST00000393387 ORC5O43913 435 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 MMP1P03956 469 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 CSF2P04141 144 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 CSH1P0DML2 217 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 CSH2P0DML3 217 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 NAT2P11245 290 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 CYP2C9P11712 490 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 M6PRP20645 277 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 PRKAG1P54619 331 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 SLC12A3P55017 1021 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 CDH13P55290 713 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 HERVK_113P63132 956 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 CRADDP78560 199 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 RIPPLY1Q0D2K3 151 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 DBPQ10586 325 aaPredicted RBP3.29□□□□□ -1.88
PHF3-202ENST00000393387 SIM2Q14190 667 aaPredicted RBP3.29□□□□□ -1.88
PHF3-202ENST00000393387 TEAD4Q15561 434 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 TIGD6Q17RP2 521 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 TIMM50Q3ZCQ8 353 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 PDZD11Q5EBL8 140 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 ZNF667Q5HYK9 610 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 METTL11BQ5VVY1 283 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 POMZP3Q6PJE2 187 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 PADI6Q6TGC4 694 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 SCIMPQ6UWF3 145 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 MRPL41Q8IXM3 137 aaKnown RBP3.29□□□□□ -1.88
PHF3-202ENST00000393387 IFNL3Q8IZI9 196 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 UBA3Q8TBC4 463 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 ADAM32Q8TC27 787 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 TCP10LQ8TDR4 215 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 JPH3Q8WXH2 748 aaPredicted RBP3.29□□□□□ -1.88
PHF3-202ENST00000393387 UPF1Q92900 1129 aaKnown RBP eCLIP3.29□□□□□ -1.88
PHF3-202ENST00000393387 SLC7A6OSQ96CW6 309 aaPredicted RBP3.29□□□□□ -1.88
PHF3-202ENST00000393387 KIF12Q96FN5 646 aa3.29□□□□□ -1.88
PHF3-202ENST00000393387 FAM167AQ96KS9 214 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms