RNA–Protein interactions for RNA: ENST00000391976.6

HDLBP-204, Transcript of high density lipoprotein binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HDLBP, Length 4,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-204ENST00000391976 ZBTB17Q13105 803 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 CYLC2Q14093 348 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-204ENST00000391976 GALNT3Q14435 633 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 VWA5B1Q5TIE3 1220 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 ANKS3Q6ZW76 656 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 ZNF513Q8N8E2 541 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-204ENST00000391976 FAM13CQ8NE31 585 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 DPF3Q92784 378 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 LRMDAQ9H2I8 198 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 RASSF9O75901 435 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 USP1O94782 785 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 RPL17P18621 184 aaKnown RBP13.38□□□□□ -0.27
HDLBP-204ENST00000391976 RGS4P49798 205 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 CCDC15Q0P6D6 951 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 TBL3Q12788 808 aaKnown RBP13.38□□□□□ -0.27
HDLBP-204ENST00000391976 UPP1Q16831 310 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 LDB1Q86U70 411 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-204ENST00000391976 DENND6AQ8IWF6 608 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 TAGAPQ8N103 731 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 DIS3LQ8TF46 1054 aaKnown RBP13.38□□□□□ -0.27
HDLBP-204ENST00000391976 OSGEPL1Q9H4B0 414 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 ALG9Q9H6U8 611 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 SEPT3Q9UH03 358 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 PSAT1Q9Y617 370 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 OR6C75A6NL08 312 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 KCNU1A8MYU2 1149 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 BAIAP3O94812 1187 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 SELPP16109 830 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 TYMPP19971 482 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 EPHA3P29320 983 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 CDC25CP30307 473 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 ATP6V1E1P36543 226 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 RPL14P50914 215 aaKnown RBP13.38□□□□□ -0.27
HDLBP-204ENST00000391976 WASHC5Q12768 1159 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 FLOT2Q14254 428 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 PAFAH1B3Q15102 231 aaKnown RBP13.38□□□□□ -0.27
HDLBP-204ENST00000391976 CCDC157Q569K6 752 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 HECTD3Q5T447 861 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 SETD3Q86TU7 594 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-204ENST00000391976 SNX32Q86XE0 403 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 EFCAB3Q8N7B9 438 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 LINC01465Q8N7H1 131 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 BTN2A3PQ96KV6 586 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 SUSD3Q96L08 255 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 CAPNS2Q96L46 248 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 TTPALQ9BTX7 342 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.38□□□□□ -0.271e-8■■□□□ 13.3
HDLBP-204ENST00000391976 KIF17Q9P2E2 1029 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 STX18Q9P2W9 335 aaKnown RBP13.38□□□□□ -0.27
HDLBP-204ENST00000391976 DNMT3LQ9UJW3 386 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 C15orf41Q9Y2V0 281 aa13.38□□□□□ -0.27
HDLBP-204ENST00000391976 MATN3O15232 486 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 PSEN1P49768 467 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 SLC18A1P54219 525 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 RARS2Q5T160 578 aaKnown RBP13.37□□□□□ -0.27
HDLBP-204ENST00000391976 GLT6D1Q7Z4J2 308 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 ZNF280BQ86YH2 543 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 CYGBQ8WWM9 190 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 C7orf26Q96N11 449 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 DEFB118Q96PH6 123 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 SPATS2LQ9NUQ6 558 aaKnown RBP13.37□□□□□ -0.27
HDLBP-204ENST00000391976 TMEM39AQ9NV64 488 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 MYO1DO94832 1006 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 IL10P22301 178 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 PRKCHP24723 683 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 INPP1P49441 399 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 EPHB3P54753 998 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 GTF2H3Q13889 308 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 SNX30Q5VWJ9 437 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 CDHR3Q6ZTQ4 885 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 LRRC49Q8IUZ0 686 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 SPPL2BQ8TCT7 592 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 HMCESQ96FZ2 354 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 YIPF2Q9BWQ6 316 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 ASPSCR1Q9BZE9 553 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 MCM3APO60318 1980 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 HNRNPLP14866 589 aaKnown RBP eCLIP13.37□□□□□ -0.274e-18■□□□□ 11
HDLBP-204ENST00000391976 CXCR3P49682 368 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 KLC1Q07866 573 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 PTK2BQ14289 1009 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 ZNF460Q14592 562 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 TRMT5Q32P41 509 aaKnown RBP13.37□□□□□ -0.27
HDLBP-204ENST00000391976 CST9Q5W186 159 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 FUT10Q6P4F1 479 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 RRM2BQ7LG56 351 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 RTL3Q8N8U3 475 aaKnown RBP13.37□□□□□ -0.27
HDLBP-204ENST00000391976 EFCAB1Q9HAE3 211 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 SLCO1B7G3V0H7 640 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 TK2O00142 265 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 LZTS3O60299 673 aaPredicted RBP13.37□□□□□ -0.27
HDLBP-204ENST00000391976 VPS26AO75436 327 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 FMO4P31512 558 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 AGKQ53H12 422 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 OR6K2Q8NGY2 324 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 PSMG2Q969U7 264 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 WDR55Q9H6Y2 383 aaPredicted RBP13.37□□□□□ -0.27
HDLBP-204ENST00000391976 CLCA2Q9UQC9 943 aa13.37□□□□□ -0.27
HDLBP-204ENST00000391976 KRT36O76013 467 aa13.36□□□□□ -0.27
HDLBP-204ENST00000391976 INHAP05111 366 aa13.36□□□□□ -0.27
HDLBP-204ENST00000391976 FAM163BP0C2L3 166 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms