RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 CERS2Q96G23 380 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 ZFYVE19Q96K21 471 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 LMLNQ96KR4 655 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 SMIM14Q96QK8 99 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 C2orf49Q9BVC5 232 aaPredicted RBP12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 KIFC1Q9BW19 673 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 TRABDQ9H4I3 376 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 PPCSQ9HAB8 311 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 MLXIPLQ9NP71 852 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 SCUBE2Q9NQ36 999 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 LHX3Q9UBR4 397 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 CHKBQ9Y259 395 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 PCDHGC4Q9Y5F7 938 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 FAM169AQ9Y6X4 670 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 LOC285095A0A1B0GVY8 99 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 TMEM120BA0PK00 339 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 AP3B1O00203 1094 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 PENKP01210 267 aaPredicted RBP12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 BMP1P13497 986 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 WEE1P30291 646 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 STK19P49842 368 aaPredicted RBP12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 SERPINH1P50454 418 aaKnown RBP12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 RHOAP61586 193 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 MSLNQ13421 630 aaPredicted RBP12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 RASA2Q15283 850 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 FUT11Q495W5 492 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 HSP90AA5PQ58FG0 334 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 ESRP1Q6NXG1 681 aaKnown RBP12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 PKN3Q6P5Z2 889 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 ARFGAP2Q8N6H7 521 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 ANKRD42Q8N9B4 389 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 MGARPQ8TDB4 240 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 ASIC4Q96FT7 647 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 AGAP2Q99490 1192 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 CDCA3Q99618 268 aaPredicted RBP12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 NSUN3Q9H649 340 aaKnown RBP12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 ARNT2Q9HBZ2 717 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 C20orf96Q9NUD7 363 aaPredicted RBP12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 TBC1D14Q9P2M4 693 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 TCAF1Q9Y4C2 921 aa12.32□□□□□ -0.44
SPTBN1-203ENST00000389980 MAGEB16A2A368 324 aa12.31□□□□□ -0.44
SPTBN1-203ENST00000389980 PDHA1P08559 390 aa12.31□□□□□ -0.44
SPTBN1-203ENST00000389980 KRT4P19013 534 aa12.31□□□□□ -0.44
SPTBN1-203ENST00000389980 MGAT5Q09328 741 aa12.31□□□□□ -0.44
SPTBN1-203ENST00000389980 LRRC14Q15048 493 aa12.31□□□□□ -0.44
SPTBN1-203ENST00000389980 INO80DQ53TQ3 878 aaPredicted RBP12.31□□□□□ -0.44
SPTBN1-203ENST00000389980 PITRM1Q5JRX3 1037 aa12.31□□□□□ -0.44
SPTBN1-203ENST00000389980 CYS1Q717R9 158 aa12.31□□□□□ -0.44
SPTBN1-203ENST00000389980 GPR149Q86SP6 731 aa12.31□□□□□ -0.44
SPTBN1-203ENST00000389980 PPHLN1Q8NEY8 458 aaKnown RBP12.31□□□□□ -0.44
SPTBN1-203ENST00000389980 PPP2R3CQ969Q6 453 aa12.31□□□□□ -0.44
SPTBN1-203ENST00000389980 SERAC1Q96JX3 654 aa12.31□□□□□ -0.44
SPTBN1-203ENST00000389980 ASB16Q96NS5 453 aa12.31□□□□□ -0.44
SPTBN1-203ENST00000389980 DUS2Q9NX74 493 aaKnown RBP12.31□□□□□ -0.44
SPTBN1-203ENST00000389980 ZFATQ9P243 1243 aa12.31□□□□□ -0.44
SPTBN1-203ENST00000389980 KCTD3Q9Y597 815 aa12.31□□□□□ -0.44
SPTBN1-203ENST00000389980 HMX2A2RU54 273 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 TRIM49D1C9J1S8 452 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 BUD23O43709 281 aaKnown RBP12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 PAPLNO95428 1278 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 SP100P23497 879 aaPredicted RBP12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 BMP8BP34820 402 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 ABCG1P45844 678 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 PTPRRQ15256 657 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 CNGA3Q16281 694 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 MROH9Q5TGP6 573 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 RETSATQ6NUM9 610 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 ANKRD54Q6NXT1 300 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 CHRDL2Q6WN34 429 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 EP400NLQ6ZTU2 488 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 KCNMB4Q86W47 210 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 PDCD6IPQ8WUM4 868 aaKnown RBP12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 FEM1CQ96JP0 617 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 NUDCD1Q96RS6 583 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 TRIB3Q96RU7 358 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 TNKS2Q9H2K2 1166 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 DZANK1Q9NVP4 752 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 ZMYM5Q9UJ78 669 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 IQANK1A0A1B0GTG1 560 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 A6NNZ2 444 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 CCL22O00626 93 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 VAPBO95292 243 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 PRLP01236 227 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 TCF3P15923 654 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 ADRA1DP25100 572 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 GKP32189 559 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 DLX2Q07687 328 aaPredicted RBP12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 DHCR24Q15392 516 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 TUBB8Q3ZCM7 444 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 TEDDM1Q5T9Z0 273 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 PACS1Q6VY07 963 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 MARK2Q7KZI7 788 aaKnown RBP12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 EFHBQ8N7U6 833 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 BLOC1S5Q8TDH9 187 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 CDKL2Q92772 493 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 ACDQ96AP0 544 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 ATXN7L3BQ96GX2 97 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 C12orf65Q9H3J6 166 aaKnown RBP12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 ZNF576Q9H609 170 aa12.3□□□□□ -0.44
SPTBN1-203ENST00000389980 IARS2Q9NSE4 1012 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms