RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 MUTYHQ9UIF7 546 aa-0.57□□□□□ -2.5
RNU6-540P-201ENST00000384622 PLCL2Q9UPR0 1127 aa-0.57□□□□□ -2.5
RNU6-540P-201ENST00000384622 RAP2CQ9Y3L5 183 aa-0.57□□□□□ -2.5
RNU6-540P-201ENST00000384622 LPAP08519 4548 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 TNRC18O15417 2968 aaPredicted RBP-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 MYO15AQ9UKN7 3530 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 SORL1Q92673 2214 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 IGKV2-28A0A075B6P5 120 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 TRBV5-7A0A0A0MS05 114 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 PLD2O14939 933 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 IGKV2D-28P01615 120 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 RFPL3SP0C7P2 107 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 MYZAPP0CAP1 466 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 SPRR2EP22531 72 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 SPRR2BP35325 72 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 SPRR2AP35326 72 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 LSSP48449 732 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 AGTR2P50052 363 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 METAP2P50579 478 aaKnown RBP eCLIP-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 IL2P60568 153 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 TIAL1Q01085 375 aaKnown RBP eCLIP-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 CYP4A11Q02928 519 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 MECOMQ03112 1051 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 LRRC63Q05C16 580 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 KHDRBS1Q07666 443 aaKnown RBP eCLIP-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 EFNB3Q15768 340 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 KRT79Q5XKE5 535 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 AAGABQ6PD74 315 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 SLC47A2Q86VL8 602 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 LSMEM2Q8N112 164 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 RHOXF1Q8NHV9 184 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 ZDHHC19Q8WVZ1 309 aaPredicted RBP-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 HDAC10Q969S8 669 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 ESAMQ96AP7 390 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 MTFMTQ96DP5 389 aaKnown RBP-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 SMR3AQ99954 134 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 BUD13Q9BRD0 619 aaKnown RBP eCLIP-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 DDX23Q9BUQ8 820 aaKnown RBP-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 CSTL1Q9H114 145 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 UPF3AQ9H1J1 476 aaKnown RBP-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 TP63Q9H3D4 680 aaPredicted RBP-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 TFB2MQ9H5Q4 396 aaKnown RBP-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 IL17CQ9P0M4 197 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 PRODH2Q9UF12 536 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 TMX2Q9Y320 296 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 SAMHD1Q9Y3Z3 626 aaKnown RBP-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 LAMA1P25391 3075 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 MYO16Q9Y6X6 1858 aa-0.58□□□□□ -2.5
RNU6-540P-201ENST00000384622 ARHGAP10A1A4S6 786 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 A6NL46 340 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 GOLGA8AA7E2F4 631 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 MYO1CO00159 1063 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 TAF4O00268 1085 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 TIMM23O14925 209 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 TBX3O15119 743 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 MID1O15344 667 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 KLF4O43474 513 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 RGS10O43665 173 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 KPNA6O60684 536 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 SRGAP2O75044 1071 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 SLCO2B1O94956 709 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 FKBP9O95302 570 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 HPRP00739 348 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 RPLP2P05387 115 aaKnown RBP-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 IGFBP1P08833 259 aaPredicted RBP-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 FTH1P19P0C7X4 201 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 OSMP13725 252 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 HLA-DOBP13765 273 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 SLC8A1P32418 973 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 NEK4P51957 841 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 WNT3P56703 355 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 KCNA1Q09470 495 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 FOXF1Q12946 379 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 SEMA3BQ13214 749 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 RASGRF1Q13972 1273 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 PLA1AQ53H76 456 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 KRTCAP3Q53RY4 240 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 PPP4R3AQ6IN85 833 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 FAM122CQ6P4D5 195 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 BRD3OSQ6XYD6 125 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 FKBP9P1Q75LS8 142 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 KIAA0907Q7Z7F0 614 aaPredicted RBP-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 C11orf96Q7Z7L8 435 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 JMYQ8N9B5 988 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 ABCF1Q8NE71 845 aaKnown RBP eCLIP-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 BBS10Q8TAM1 723 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 ASB12Q8WXK4 309 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 GTF3AQ92664 365 aaKnown RBP-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 DHX58Q96C10 678 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 FAM122AQ96E09 287 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 GIMAP5Q96F15 307 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 GAL3ST4Q96RP7 486 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 ABHD14AQ9BUJ0 271 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 RSPO3Q9BXY4 272 aaPredicted RBP-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 TRIM5Q9C035 493 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 BICC1Q9H694 974 aaKnown RBP-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 FKRPQ9H9S5 495 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 EMC7Q9NPA0 242 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 INPP5EQ9NRR6 644 aa-0.59□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms