RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 TAF1BQ53T94 588 aaPredicted RBP18.12■□□□□ 0.49
RPUSD3-201ENST00000383820 INO80DQ53TQ3 878 aaPredicted RBP18.12■□□□□ 0.49
RPUSD3-201ENST00000383820 PRRT3Q5FWE3 981 aa18.12■□□□□ 0.49
RPUSD3-201ENST00000383820 C3orf38Q5JPI3 329 aa18.12■□□□□ 0.49
RPUSD3-201ENST00000383820 MACC1Q6ZN28 852 aa18.12■□□□□ 0.49
RPUSD3-201ENST00000383820 TTC7BQ86TV6 843 aa18.12■□□□□ 0.49
RPUSD3-201ENST00000383820 RBFAQ8N0V3 343 aa18.12■□□□□ 0.49
RPUSD3-201ENST00000383820 SLC20A1Q8WUM9 679 aa18.12■□□□□ 0.49
RPUSD3-201ENST00000383820 SLC13A1Q9BZW2 595 aa18.12■□□□□ 0.49
RPUSD3-201ENST00000383820 TTYH3Q9C0H2 523 aa18.12■□□□□ 0.49
RPUSD3-201ENST00000383820 GANQ9H2C0 597 aa18.12■□□□□ 0.49
RPUSD3-201ENST00000383820 SAMSN1Q9NSI8 373 aaKnown RBP18.12■□□□□ 0.49
RPUSD3-201ENST00000383820 GCATO75600 419 aa18.11■□□□□ 0.49
RPUSD3-201ENST00000383820 GFPT2O94808 682 aa18.11■□□□□ 0.49
RPUSD3-201ENST00000383820 TMCC1O94876 653 aa18.11■□□□□ 0.49
RPUSD3-201ENST00000383820 IGSF6O95976 241 aa18.11■□□□□ 0.49
RPUSD3-201ENST00000383820 PLA2G2AP14555 144 aa18.11■□□□□ 0.49
RPUSD3-201ENST00000383820 BLKP51451 505 aa18.11■□□□□ 0.49
RPUSD3-201ENST00000383820 ADKP55263 362 aaKnown RBP18.11■□□□□ 0.49
RPUSD3-201ENST00000383820 HDAC4P56524 1084 aa18.11■□□□□ 0.49
RPUSD3-201ENST00000383820 VAC14Q08AM6 782 aa18.11■□□□□ 0.49
RPUSD3-201ENST00000383820 VPS36Q86VN1 386 aa18.11■□□□□ 0.49
RPUSD3-201ENST00000383820 SLC35F3Q8IY50 421 aa18.11■□□□□ 0.49
RPUSD3-201ENST00000383820 JOSD2Q8TAC2 188 aa18.11■□□□□ 0.49
RPUSD3-201ENST00000383820 GPT2Q8TD30 523 aa18.11■□□□□ 0.49
RPUSD3-201ENST00000383820 CXorf40AQ8TE69 158 aa18.11■□□□□ 0.49
RPUSD3-201ENST00000383820 ATXN7L3BQ96GX2 97 aa18.11■□□□□ 0.49
RPUSD3-201ENST00000383820 C11orf70Q9BRQ4 267 aa18.11■□□□□ 0.49
RPUSD3-201ENST00000383820 LRRC61Q9BV99 259 aa18.11■□□□□ 0.49
RPUSD3-201ENST00000383820 CPNE5Q9HCH3 593 aa18.11■□□□□ 0.49
RPUSD3-201ENST00000383820 A0A1W2PNU3 283 aaPredicted RBP18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 TMEM110-MUSTN1A8MSY1 372 aa18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 MUSKO15146 869 aa18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 BUB1O43683 1085 aa18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 MMP20O60882 483 aa18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 KRT3P12035 628 aa18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 CHRNB2P17787 502 aa18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 SOX5P35711 763 aa18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 EIF4A3P38919 411 aaKnown RBP18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 PEX5P50542 639 aa18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 YBEYP58557 167 aaPredicted RBP18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 PPARDQ03181 441 aa18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 PERM1Q5SV97 790 aa18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 ATXN7L2Q5T6C5 722 aaPredicted RBP18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 ARHGAP40Q5TG30 622 aa18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 FAXCQ5TGI0 409 aa18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 ESRP1Q6NXG1 681 aaKnown RBP18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 SDR16C5Q8N3Y7 309 aa18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 FSTL5Q8N475 847 aaPredicted RBP18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 CCDC185Q8N715 623 aa18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 RTL3Q8N8U3 475 aaKnown RBP18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 TP53I13Q8NBR0 393 aaPredicted RBP18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 WDR36Q8NI36 951 aaKnown RBP18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 HCAR2Q8TDS4 363 aa18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 FAM172AQ8WUF8 416 aa18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 PRR11Q96HE9 360 aaPredicted RBP18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 EPAS1Q99814 870 aa18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 CPEB1Q9BZB8 566 aaKnown RBP18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 TCEAL2Q9H3H9 227 aaPredicted RBP18.1■□□□□ 0.49
RPUSD3-201ENST00000383820 RP1P56715 2156 aa18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 CDRT15L2A8MXV6 281 aa18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 YY2O15391 372 aa18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 UNGP13051 313 aaPredicted RBP18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 TIMP2P16035 220 aa18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 JAM2P57087 298 aa18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 RHOAP61586 193 aa18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 ELP6Q0PNE2 266 aa18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 PTP4A2Q12974 167 aa18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 C1orf61Q13536 156 aa18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 GRM3Q14832 879 aa18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 TMEM52BQ4KMG9 183 aa18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 LVRNQ6Q4G3 990 aa18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 LEKR1Q6ZMV7 388 aa18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 SLFN11Q7Z7L1 901 aa18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 CLEC14AQ86T13 490 aa18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 ZNF354CQ86Y25 554 aa18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 ARL14Q8N4G2 192 aa18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 SLC30A5Q8TAD4 765 aa18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 SCG3Q8WXD2 468 aaKnown RBP18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 MAGEB5Q9BZ81 275 aa18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 CLPBQ9H078 707 aa18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 NOL6Q9H6R4 1146 aaKnown RBP18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 MBNL1Q9NR56 388 aaKnown RBP18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 TAB2Q9NYJ8 693 aa18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 PNMA8BQ9ULN7 279 aaPredicted RBP18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 PADI4Q9UM07 663 aa18.09■□□□□ 0.49
RPUSD3-201ENST00000383820 MGAQ8IWI9 3026 aa18.08■□□□□ 0.49
RPUSD3-201ENST00000383820 CCDC187A0A096LP49 1063 aa18.08■□□□□ 0.48
RPUSD3-201ENST00000383820 ALPIP09923 528 aa18.08■□□□□ 0.48
RPUSD3-201ENST00000383820 TSHRP16473 764 aa18.08■□□□□ 0.48
RPUSD3-201ENST00000383820 GPD1P21695 349 aa18.08■□□□□ 0.48
RPUSD3-201ENST00000383820 EPHB2P29323 1055 aa18.08■□□□□ 0.48
RPUSD3-201ENST00000383820 RFC1P35251 1148 aaPredicted RBP18.08■□□□□ 0.48
RPUSD3-201ENST00000383820 NSFP46459 744 aaKnown RBP18.08■□□□□ 0.48
RPUSD3-201ENST00000383820 AIF1P55008 147 aa18.08■□□□□ 0.48
RPUSD3-201ENST00000383820 POLR2FP61218 127 aaKnown RBP18.08■□□□□ 0.48
RPUSD3-201ENST00000383820 SPIDRQ14159 915 aa18.08■□□□□ 0.48
RPUSD3-201ENST00000383820 ELOCQ15369 112 aa18.08■□□□□ 0.48
RPUSD3-201ENST00000383820 KLHL40Q2TBA0 621 aa18.08■□□□□ 0.48
RPUSD3-201ENST00000383820 PARP15Q460N3 678 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms