RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 KIAA1522Q9P206 1035 aaPredicted RBP13.7□□□□□ -0.22
SEC13-203ENST00000383801 CORO1CQ9ULV4 474 aaPredicted RBP13.7□□□□□ -0.22
SEC13-203ENST00000383801 OR51B4Q9Y5P0 310 aa13.7□□□□□ -0.22
SEC13-203ENST00000383801 PSAT1Q9Y617 370 aa13.7□□□□□ -0.22
SEC13-203ENST00000383801 ALPK3Q96L96 1907 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 CCT8L1PA6NM43 557 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 ZNF197O14709 1029 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 VAPBO95292 243 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 CRTAMO95727 393 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 SPATA31D3P0C874 917 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 TROVE2P10155 538 aaKnown RBP eCLIP13.69□□□□□ -0.22
SEC13-203ENST00000383801 NEFHP12036 1026 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 CRABP2P29373 138 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 LEPRP48357 1165 aaKnown RBP13.69□□□□□ -0.22
SEC13-203ENST00000383801 PRKAA2P54646 552 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 PPARDQ03181 441 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 CCDC15Q0P6D6 951 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 IFT88Q13099 833 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 CYTH1Q15438 398 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 CNGA3Q16281 694 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 PCSK7Q16549 785 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 LACTB2Q53H82 288 aaPredicted RBP13.69□□□□□ -0.22
SEC13-203ENST00000383801 SPDYAQ5MJ70 313 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 NEPROQ6NW34 567 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 CDHR3Q6ZTQ4 885 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 SPATA31D4Q6ZUB0 917 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 NUDCD3Q8IVD9 361 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 OR52K2Q8NGK3 314 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 GPR150Q8NGU9 434 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 SREK1Q8WXA9 508 aaKnown RBP13.69□□□□□ -0.22
SEC13-203ENST00000383801 OTUB2Q96DC9 234 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 VPS39Q96JC1 886 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 ZNF778Q96MU6 729 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 C7orf26Q96N11 449 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 TRIB3Q96RU7 358 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 SLC22A12Q96S37 553 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 AGAP2Q99490 1192 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 SIKE1Q9BRV8 207 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 ADGRE3Q9BY15 652 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 MCOLN1Q9GZU1 580 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 MFSD1Q9H3U5 465 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 TASP1Q9H6P5 420 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 ACTR5Q9H9F9 607 aaPredicted RBP13.69□□□□□ -0.22
SEC13-203ENST00000383801 ALG13Q9NP73 1137 aaKnown RBP13.69□□□□□ -0.22
SEC13-203ENST00000383801 SCUBE2Q9NQ36 999 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 SNX15Q9NRS6 342 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 PCMTD2Q9NV79 361 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 SMPD4Q9NXE4 827 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 HACD3Q9P035 362 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 TBC1D14Q9P2M4 693 aa13.69□□□□□ -0.22
SEC13-203ENST00000383801 CBX4O00257 560 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 TSPAN3O60637 253 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 PAPLNO95428 1278 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 AHSGP02765 367 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 ATP5BP06576 529 aaKnown RBP13.68□□□□□ -0.22
SEC13-203ENST00000383801 BPGMP07738 259 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 GRK2P25098 689 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 WEE1P30291 646 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 CORO7P57737 925 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 ZXDBP98169 803 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 POU4F1Q01851 419 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 CDH18Q13634 790 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 HS6ST3Q8IZP7 471 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 CMTM8Q8IZV2 173 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 CARNMT1Q8N4J0 409 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 SLC25A41Q8N5S1 370 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 TDRD5Q8NAT2 981 aaKnown RBP13.68□□□□□ -0.22
SEC13-203ENST00000383801 RDH11Q8TC12 318 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 CCT6BQ92526 530 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 WBP2Q969T9 261 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 E2F7Q96AV8 911 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 ALG14Q96F25 216 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 TSNARE1Q96NA8 513 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 CORO1BQ9BR76 489 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 TSSK1BQ9BXA7 367 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 SLC46A2Q9BY10 475 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 TLK1Q9UKI8 766 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 FBXO5Q9UKT4 447 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 USH1CQ9Y6N9 552 aa13.68□□□□□ -0.22
SEC13-203ENST00000383801 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.67□□□□□ -0.22
SEC13-203ENST00000383801 A0A1W2PRU2 124 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 HIDE1A8MVS5 230 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 LEFTY2O00292 366 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 MUSKO15146 869 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 LDB2O43679 373 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 PLIN3O60664 434 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 H2AFYO75367 372 aaKnown RBP13.67□□□□□ -0.22
SEC13-203ENST00000383801 MYL4P12829 197 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 ARNTP27540 789 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 AVPR1AP37288 418 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 SLC26A3P40879 764 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 CHRNA4P43681 627 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 CD151P48509 253 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 SGSHP51688 502 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 KPNA2P52292 529 aaKnown RBP13.67□□□□□ -0.22
SEC13-203ENST00000383801 RPL26P61254 145 aaKnown RBP13.67□□□□□ -0.22
SEC13-203ENST00000383801 AP1S1P61966 158 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 ARF5P84085 180 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 CYP4F8P98187 520 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 TAF1BQ53T94 588 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms