RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 hCG_2014768A0A024R1R8 64 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 SYNJ2BP-COX16A0A087WUM0 186 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 A0A0A0MRY4 1105 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 SH3PXD2BA1X283 911 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 F8W810 466 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 H3BSA7 217 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 B4GALT3O60512 393 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 ZNF189O75820 626 aaPredicted RBP9.04□□□□□ -0.96
GPNMB-202ENST00000381990 ZNF26P17031 533 aaPredicted RBP9.04□□□□□ -0.96
GPNMB-202ENST00000381990 SPRP35270 261 aaPredicted RBP9.04□□□□□ -0.96
GPNMB-202ENST00000381990 ADRA1BP35368 520 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 YWHAHQ04917 246 aaPredicted RBP9.04□□□□□ -0.96
GPNMB-202ENST00000381990 BFSP2Q13515 415 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 FRG1Q14331 258 aaKnown RBP9.04□□□□□ -0.96
GPNMB-202ENST00000381990 SPANXN3Q5MJ09 141 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 SEL1L3Q68CR1 1132 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 NCBP2-AS2Q69YL0 99 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 BHLHA9Q7RTU4 235 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 LRRTM3Q86VH5 581 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 COLGALT2Q8IYK4 626 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 EFCAB3Q8N7B9 438 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 RIN3Q8TB24 985 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 SLC7A14Q8TBB6 771 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 RDH11Q8TC12 318 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 RNF139Q8WU17 664 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 EME1Q96AY2 570 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 SPATA13Q96N96 652 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 PKP2Q99959 881 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 PLGRKTQ9HBL7 147 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 MAN1C1Q9NR34 630 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 VPS45Q9NRW7 570 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 PNPLA3Q9NST1 481 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 TBC1D13Q9NVG8 400 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 FAIMQ9NVQ4 179 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 COX16Q9P0S2 106 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 PCDHGB4Q9UN71 923 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 FAF1Q9UNN5 650 aaPredicted RBP9.04□□□□□ -0.96
GPNMB-202ENST00000381990 MYRFQ9Y2G1 1151 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 RAP2CQ9Y3L5 183 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 PCDHGB5Q9Y5G0 923 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 MAP3K6O95382 1288 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 F9P00740 461 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 NCAM1P13591 858 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 PSMD8P48556 350 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 GALK1P51570 392 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 CDKL1Q00532 357 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 SCAPQ12770 1279 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 SLC10A2Q12908 348 aaPredicted RBP9.03□□□□□ -0.96
GPNMB-202ENST00000381990 PDAP1Q13442 181 aaKnown RBP9.03□□□□□ -0.96
GPNMB-202ENST00000381990 ART3Q13508 389 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 KLHL35Q6PF15 583 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 POTEHQ6S545 545 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 AMIGO2Q86SJ2 522 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 CARM1Q86X55 608 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 SMYD1Q8NB12 490 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 ABTB1Q969K4 478 aaPredicted RBP9.03□□□□□ -0.96
GPNMB-202ENST00000381990 ASB9Q96DX5 294 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 TMEM209Q96SK2 561 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 TRIM62Q9BVG3 475 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 ZNF385DQ9H6B1 395 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 ELAC1Q9H777 363 aaKnown RBP9.03□□□□□ -0.96
GPNMB-202ENST00000381990 WDR41Q9HAD4 459 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 WDR6Q9NNW5 1121 aaKnown RBP9.03□□□□□ -0.96
GPNMB-202ENST00000381990 SAGE1Q9NXZ1 904 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 TUBA8Q9NY65 449 aaPredicted RBP9.03□□□□□ -0.96
GPNMB-202ENST00000381990 UTP6Q9NYH9 597 aaKnown RBP9.03□□□□□ -0.96
GPNMB-202ENST00000381990 DTLQ9NZJ0 730 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 PCDHGA4Q9Y5G9 962 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 NLRC5Q86WI3 1866 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 PATJQ8NI35 1801 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 G3V2L1 256 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 ACOT8O14734 319 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 CBFA2T3O75081 653 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 ATP6V1G1O75348 118 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 C8BP07358 591 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 HADHAP40939 763 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 GRIA1P42261 906 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 CD97P48960 835 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 RPL14P50914 215 aaKnown RBP9.03□□□□□ -0.96
GPNMB-202ENST00000381990 CEACAM7Q14002 265 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 SPIDRQ14159 915 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 IRAK1BP1Q5VVH5 260 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 KCNT2Q6UVM3 1135 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 TRIM67Q6ZTA4 783 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 LPCAT2Q7L5N7 544 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 CLEC14AQ86T13 490 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 SPATA2LQ8IUW3 424 aaPredicted RBP9.03□□□□□ -0.96
GPNMB-202ENST00000381990 FAM126BQ8IXS8 530 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 UNC5BQ8IZJ1 945 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 HTR3CQ8WXA8 447 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 ARNTL2Q8WYA1 636 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 CERS2Q96G23 380 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 FAM193BQ96PV7 902 aaPredicted RBP9.03□□□□□ -0.96
GPNMB-202ENST00000381990 OR52B2Q96RD2 323 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 RBBP8Q99708 897 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 ZBTB26Q9HCK0 441 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 DDIT4Q9NX09 232 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 IGSF9Q9P2J2 1179 aa9.03□□□□□ -0.96
GPNMB-202ENST00000381990 SUCOQ9UBS9 1254 aaKnown RBP9.03□□□□□ -0.96
GPNMB-202ENST00000381990 FBXW11Q9UKB1 542 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms