RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 RETREG3Q86VR2 466 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 AKR7LQ8NHP1 331 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 PXYLP1Q8TE99 480 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 GANCQ8TET4 914 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 SLC44A1Q8WWI5 657 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 AZIN2Q96A70 460 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 SHISA4Q96DD7 197 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 ZC3HAV1LQ96H79 300 aaKnown RBP5.77□□□□□ -1.49
RFC1-202ENST00000381897 RHOVQ96L33 236 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 MNTQ99583 582 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 C9orf16Q9BUW7 83 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 ELP3Q9H9T3 547 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 TRPC7Q9HCX4 862 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 CROTQ9UKG9 612 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 DNPEPQ9ULA0 475 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 KCNH4Q9UQ05 1017 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 CYP3A7-CYP3A51PA0A087WV96 503 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 A0A0U1RQK1 487 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 TCRBV7S2A1N4TA0A589 114 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 ZNF320A2RRD8 509 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 TMEM114B3SHH9 223 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 H0YJX3 145 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 FAM189A1O60320 539 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 VPS4BO75351 444 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 H6PDO95479 791 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 LSM8O95777 96 aaKnown RBP5.77□□□□□ -1.49
RFC1-202ENST00000381897 NPPAP01160 153 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 CYP19A1P11511 503 aaPredicted RBP5.77□□□□□ -1.49
RFC1-202ENST00000381897 CCNA2P20248 432 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 PTNP21246 168 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 CYP3A7P24462 503 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 RAD52P43351 418 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 CCT3P49368 545 aaKnown RBP5.77□□□□□ -1.49
RFC1-202ENST00000381897 LBX1P52954 281 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 PRSS12P56730 875 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 MRPS22P82650 360 aaKnown RBP5.77□□□□□ -1.49
RFC1-202ENST00000381897 PURAQ00577 322 aaKnown RBP5.77□□□□□ -1.49
RFC1-202ENST00000381897 DLG1Q12959 904 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 MTMR1Q13613 665 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 ITGA7Q13683 1181 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 UBAP2LQ14157 1087 aaKnown RBP5.77□□□□□ -1.49
RFC1-202ENST00000381897 SFT2D3Q587I9 215 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 METTL21CQ5VZV1 264 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 SPOPLQ6IQ16 392 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 HAUS6Q7Z4H7 955 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 CAMK1DQ8IU85 385 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 MICALL2Q8IY33 904 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 POU5F2Q8N7G0 328 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 SLC44A5Q8NCS7 719 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 BHLHE22Q8NFJ8 381 aaPredicted RBP5.77□□□□□ -1.49
RFC1-202ENST00000381897 ZNF420Q8TAQ5 688 aaPredicted RBP5.77□□□□□ -1.49
RFC1-202ENST00000381897 PNPT1Q8TCS8 783 aaKnown RBP5.77□□□□□ -1.49
RFC1-202ENST00000381897 CHURC1Q8WUH1 139 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 CLPTM1LQ96KA5 538 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 SGIP1Q9BQI5 828 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 ZNF518BQ9C0D4 1074 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 CAB39LQ9H9S4 337 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 C3orf14Q9HBI5 128 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 EML4Q9HC35 981 aaKnown RBP5.77□□□□□ -1.49
RFC1-202ENST00000381897 TCF7L2Q9NQB0 619 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 STK39Q9UEW8 545 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 CCPG1Q9ULG6 757 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 PLLPQ9Y342 182 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 SESN1Q9Y6P5 492 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 UTRNP46939 3433 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 HEATR9A2RTY3 570 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 SMIM30A4D0T7 59 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 SYCE1LA8MT33 242 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 ZNF701M0R085 212 aaPredicted RBP5.76□□□□□ -1.49
RFC1-202ENST00000381897 PPEF1O14829 653 aaPredicted RBP5.76□□□□□ -1.49
RFC1-202ENST00000381897 CHADO15335 359 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 CST8O60676 142 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 DNAJA2O60884 412 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 CLEC3AO75596 197 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 SEC24DO94855 1032 aaPredicted RBP5.76□□□□□ -1.49
RFC1-202ENST00000381897 HSMCR30P0CW71 290 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 CSF2RAP15509 400 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 ZNF24P17028 368 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 NAT1P18440 290 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 HOXD12P35452 270 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 ELK3P41970 407 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 GABRB2P47870 512 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 NR0B1P51843 470 aaKnown RBP5.76□□□□□ -1.49
RFC1-202ENST00000381897 RACK1P63244 317 aaKnown RBP5.76□□□□□ -1.49
RFC1-202ENST00000381897 GPSM2P81274 684 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 FMO1Q01740 532 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 CAMK2GQ13555 558 aaPredicted RBP5.76□□□□□ -1.49
RFC1-202ENST00000381897 PPA1Q15181 289 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 ZBED5Q49AG3 693 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 WIPI1Q5MNZ9 446 aaPredicted RBP5.76□□□□□ -1.49
RFC1-202ENST00000381897 UBXN10Q96LJ8 280 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 SLITRK1Q96PX8 696 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 CHCHD6Q9BRQ6 235 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 HACL1Q9UJ83 578 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 NENFQ9UMX5 172 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 DHDHQ9UQ10 334 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 POMPQ9Y244 141 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 COA3Q9Y2R0 106 aaPredicted RBP5.76□□□□□ -1.49
RFC1-202ENST00000381897 PCDHA2Q9Y5H9 948 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 C1orf232A0A0U1RR37 186 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms