RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 CNTD1Q8N815 330 aa16.43■□□□□ 0.22
NKX3-1-201ENST00000380871 GRIN3AQ8TCU5 1115 aa16.43■□□□□ 0.22
NKX3-1-201ENST00000380871 STYXQ8WUJ0 223 aa16.43■□□□□ 0.22
NKX3-1-201ENST00000380871 CYP4F12Q9HCS2 524 aa16.43■□□□□ 0.22
NKX3-1-201ENST00000380871 PRSS51A0A1B0GVH4 220 aa16.43■□□□□ 0.22
NKX3-1-201ENST00000380871 RANBP1P43487 201 aa16.43■□□□□ 0.22
NKX3-1-201ENST00000380871 PRKAA1Q13131 559 aa16.43■□□□□ 0.22
NKX3-1-201ENST00000380871 SEMA3BQ13214 749 aa16.43■□□□□ 0.22
NKX3-1-201ENST00000380871 ARL13BQ3SXY8 428 aa16.43■□□□□ 0.22
NKX3-1-201ENST00000380871 KDM1BQ8NB78 822 aa16.43■□□□□ 0.22
NKX3-1-201ENST00000380871 TXNDC5Q8NBS9 432 aaKnown RBP16.43■□□□□ 0.22
NKX3-1-201ENST00000380871 ABI2Q9NYB9 513 aaPredicted RBP16.43■□□□□ 0.22
NKX3-1-201ENST00000380871 GMPR2Q9P2T1 348 aaKnown RBP16.43■□□□□ 0.22
NKX3-1-201ENST00000380871 TARM1B6A8C7 271 aa16.43■□□□□ 0.22
NKX3-1-201ENST00000380871 ASLP04424 464 aa16.43■□□□□ 0.22
NKX3-1-201ENST00000380871 CCND3P30281 292 aaPredicted RBP16.43■□□□□ 0.22
NKX3-1-201ENST00000380871 CSRP3P50461 194 aa16.43■□□□□ 0.22
NKX3-1-201ENST00000380871 CYTH1Q15438 398 aa16.43■□□□□ 0.22
NKX3-1-201ENST00000380871 PPP1R3AQ16821 1122 aa16.43■□□□□ 0.22
NKX3-1-201ENST00000380871 MFSD14CQ5VZR4 134 aa16.43■□□□□ 0.22
NKX3-1-201ENST00000380871 OR10T2Q8NGX3 314 aa16.43■□□□□ 0.22
NKX3-1-201ENST00000380871 SLC2A13Q96QE2 648 aa16.43■□□□□ 0.22
NKX3-1-201ENST00000380871 RBM38Q9H0Z9 239 aaKnown RBP16.43■□□□□ 0.22
NKX3-1-201ENST00000380871 GTSE1Q9NYZ3 720 aa16.43■□□□□ 0.22
NKX3-1-201ENST00000380871 DDHD2O94830 711 aa16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 PLK1P53350 603 aa16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 CSE1LP55060 971 aaKnown RBP16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 PRKCZQ05513 592 aa16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 PTK2BQ14289 1009 aa16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 IL31Q6EBC2 164 aa16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 ESRP1Q6NXG1 681 aaKnown RBP16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 CPSF7Q8N684 471 aaKnown RBP16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 TMEM102Q8N9M5 508 aaPredicted RBP16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 HMGCLL1Q8TB92 370 aa16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 FAM110BQ8TC76 370 aa16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 SMARCD1Q96GM5 515 aa16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 ZNF512Q96ME7 567 aaPredicted RBP16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 SENP6Q9GZR1 1112 aaPredicted RBP16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 IL22Q9GZX6 179 aa16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 OSBPL2Q9H1P3 480 aa16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 RHOJQ9H4E5 214 aa16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 HSFX1Q9UBD0 423 aa16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 FBXW11Q9UKB1 542 aa16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 HNRNPRO43390 633 aaKnown RBP16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 BCAS2O75934 225 aaPredicted RBP16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 CABYRO75952 493 aa16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 PCSK1P29120 753 aa16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 PABPC1LQ4VXU2 614 aaKnown RBP16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 OVOS1Q6IE37 1185 aa16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 CNSTQ6PJW8 725 aa16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 GPR78Q96P69 363 aa16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 RAB26Q9ULW5 256 aa16.42■□□□□ 0.22
NKX3-1-201ENST00000380871 C7orf72A4D263 438 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 GPR182O15218 404 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 H2AFYO75367 372 aaKnown RBP16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 KCNA5P22460 613 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 ARNTP27540 789 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 LAYNQ6UX15 382 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 CYP2R1Q6VVX0 501 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 RNF135Q8IUD6 432 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 IPMKQ8NFU5 416 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 RTP3Q9BQQ7 232 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 MRPL1Q9BYD6 325 aaKnown RBP16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 EFCAB1Q9HAE3 211 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 HEMK1Q9Y5R4 338 aaPredicted RBP16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 TSC2P49815 1807 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 E7ENX8 843 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 SDHDO14521 159 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 RPL10P27635 214 aaKnown RBP16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 UPP1Q16831 310 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 PDZD4Q76G19 769 aaPredicted RBP16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 LRTOMTQ8WZ04 291 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 KCTD13Q8WZ19 329 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 B3GALT6Q96L58 329 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 TSNARE1Q96NA8 513 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 Q9H521 79 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 CNGB3Q9NQW8 809 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 MPP6Q9NZW5 540 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 CDH9Q9ULB4 789 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 MTF2Q9Y483 593 aaPredicted RBP16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 UNCXA6NJT0 531 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 ODC1P11926 461 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 USP46P62068 366 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 SLC12A1Q13621 1099 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 LRRC23Q53EV4 343 aaPredicted RBP16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 NOMO2Q5JPE7 1267 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 DQX1Q8TE96 717 aaKnown RBP16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 TEKT5Q96M29 485 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 SLC39A3Q9BRY0 314 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 PCDHGA7Q9Y5G6 932 aa16.41■□□□□ 0.22
NKX3-1-201ENST00000380871 H3BSA7 217 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 TNFAIP8O95379 198 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 CHRNA4P43681 627 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 MAP7Q14244 749 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 BTBD8Q5XKL5 378 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 ZFP1Q6P2D0 407 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 SAPCD2Q86UD0 394 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 ADCY4Q8NFM4 1077 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 SOCS4Q8WXH5 440 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 EME1Q96AY2 570 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms