RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 LHX5Q9H2C1 402 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 SPATA2Q9UM82 520 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 KIDINS220Q9ULH0 1771 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 ADCY6O43306 1168 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 OTCP00480 354 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 MAPK10P53779 464 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 IQCKQ8N0W5 287 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 CDYL2Q8N8U2 506 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 TSPAN18Q96SJ8 248 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 MRPL17Q9NRX2 175 aaKnown RBP16.16■□□□□ 0.18
COL2A1-202ENST00000380518 SLC12A4Q9UP95 1085 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 EFR3BQ9Y2G0 817 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 PREX1Q8TCU6 1659 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 YDJCA8MPS7 323 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 B4GALT5O43286 388 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 RPL3P39023 403 aaKnown RBP16.16■□□□□ 0.18
COL2A1-202ENST00000380518 FUT2Q10981 343 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 ULK2Q8IYT8 1036 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 GSTK1Q9Y2Q3 226 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 PIAS1O75925 651 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 FGRP09769 529 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 ANPEPP15144 967 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 LPOP22079 712 aaPredicted RBP16.16■□□□□ 0.18
COL2A1-202ENST00000380518 JAK1P23458 1154 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 HIRAP54198 1017 aaPredicted RBP16.16■□□□□ 0.18
COL2A1-202ENST00000380518 CDK18Q07002 472 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 NOMO2Q5JPE7 1267 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 IRF2BP1Q8IU81 584 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 CACTIN-AS1Q8N1I8 211 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 SFRP1Q8N474 314 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 POP5Q969H6 163 aaKnown RBP16.16■□□□□ 0.18
COL2A1-202ENST00000380518 TM6SF2Q9BZW4 377 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.16■□□□□ 0.18
COL2A1-202ENST00000380518 PCDH18Q9HCL0 1135 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 PRPF19Q9UMS4 504 aaKnown RBP16.16■□□□□ 0.18
COL2A1-202ENST00000380518 FFAR3O14843 346 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 GPR42O15529 346 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 SNAP91O60641 907 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 PDE9AO76083 593 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 MMP8P22894 467 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 EPHA3P29320 983 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 MAPK9P45984 424 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 CSNK2BP67870 215 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 PDK3Q15120 406 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 BROXQ5VW32 411 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 LYPLAL1Q5VWZ2 237 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 SPESP1Q6UW49 350 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 TNS4Q8IZW8 715 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 CLYBLQ8N0X4 340 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 TOP6BLQ8N6T0 577 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 C4orf32Q8N8J7 132 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 C12orf29Q8N999 325 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 PIK3R5Q8WYR1 880 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 SLC4A9Q96Q91 983 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 DUSP16Q9BY84 665 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 FANCEQ9HB96 536 aa16.16■□□□□ 0.18
COL2A1-202ENST00000380518 SLC28A1O00337 649 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 AZIN1O14977 448 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 FGF1P05230 155 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 UMPSP11172 480 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 CRYBB1P53674 252 aaPredicted RBP16.15■□□□□ 0.18
COL2A1-202ENST00000380518 ATP12AP54707 1039 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 NR1H2P55055 460 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 PFKPQ01813 784 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 CTBP1Q13363 440 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 UBAP2LQ14157 1087 aaKnown RBP16.15■□□□□ 0.18
COL2A1-202ENST00000380518 ECM1Q16610 540 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 UGCGQ16739 394 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 BRMS1LQ5PSV4 323 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 ABRAXAS1Q6UWZ7 409 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 GCNT7Q6ZNI0 430 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 RASGEF1CQ8N431 466 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 POMGNT2Q8NAT1 580 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 GRIN3AQ8TCU5 1115 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 ZNF558Q96NG5 402 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 CLEC4MQ9H2X3 399 aaPredicted RBP16.15■□□□□ 0.18
COL2A1-202ENST00000380518 ADSSP30520 456 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 TAB1Q15750 504 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 GJC2Q5T442 439 aaPredicted RBP16.15■□□□□ 0.18
COL2A1-202ENST00000380518 PPP1R26Q5T8A7 1209 aaPredicted RBP16.15■□□□□ 0.18
COL2A1-202ENST00000380518 EIF3MQ7L2H7 374 aaKnown RBP16.15■□□□□ 0.18
COL2A1-202ENST00000380518 CROCCP3Q8IVE0 287 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 ZFP28Q8NHY6 868 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 TNFRSF25Q93038 417 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 RCN3Q96D15 328 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 P2RY11Q96G91 374 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 TRMOQ9BU70 441 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 ADI1Q9BV57 179 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 ZFP14Q9HCL3 533 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 PACSIN3Q9UKS6 424 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 ZNF232Q9UNY5 417 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 POLR1DQ9Y2S0 133 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 TRAV19A0A0A6YYK7 116 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 MSCO60682 206 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 MAGEC1O60732 1142 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 CES1P23141 567 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 PAX7P23759 505 aa16.15■□□□□ 0.18
COL2A1-202ENST00000380518 ADARP55265 1226 aaKnown RBP16.15■□□□□ 0.18
COL2A1-202ENST00000380518 RPL38P63173 70 aaKnown RBP16.15■□□□□ 0.18
COL2A1-202ENST00000380518 STRADAQ7RTN6 431 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms