RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 OTUD4Q01804 1114 aaKnown RBP20.24■□□□□ 0.83
RER1-204ENST00000378518 PRKD1Q15139 912 aaPredicted RBP20.24■□□□□ 0.83
RER1-204ENST00000378518 KIAA0895LQ68EN5 471 aa20.24■□□□□ 0.83
RER1-204ENST00000378518 NCEH1Q6PIU2 408 aa20.24■□□□□ 0.83
RER1-204ENST00000378518 ASCL5Q7RTU5 278 aa20.24■□□□□ 0.83
RER1-204ENST00000378518 SLC41A1Q8IVJ1 513 aa20.24■□□□□ 0.83
RER1-204ENST00000378518 ACTL9Q8TC94 416 aa20.24■□□□□ 0.83
RER1-204ENST00000378518 SNX19Q92543 992 aa20.24■□□□□ 0.83
RER1-204ENST00000378518 IL12RB2Q99665 862 aa20.24■□□□□ 0.83
RER1-204ENST00000378518 HERPUD2Q9BSE4 406 aa20.24■□□□□ 0.83
RER1-204ENST00000378518 JRKLQ9Y4A0 524 aa20.24■□□□□ 0.83
RER1-204ENST00000378518 A0A1W2PQ67 120 aa20.23■□□□□ 0.83
RER1-204ENST00000378518 GFRA3O60609 400 aa20.23■□□□□ 0.83
RER1-204ENST00000378518 ZNF189O75820 626 aaPredicted RBP20.23■□□□□ 0.83
RER1-204ENST00000378518 FSBPO95073 299 aa20.23■□□□□ 0.83
RER1-204ENST00000378518 SUOXP51687 545 aa20.23■□□□□ 0.83
RER1-204ENST00000378518 ZNF569Q5MCW4 686 aa20.23■□□□□ 0.83
RER1-204ENST00000378518 BRAT1Q6PJG6 821 aa20.23■□□□□ 0.83
RER1-204ENST00000378518 CAMK1DQ8IU85 385 aa20.23■□□□□ 0.83
RER1-204ENST00000378518 CDKL3Q8IVW4 592 aaPredicted RBP20.23■□□□□ 0.83
RER1-204ENST00000378518 PIGKQ92643 395 aa20.23■□□□□ 0.83
RER1-204ENST00000378518 QKIQ96PU8 341 aaKnown RBP eCLIP20.23■□□□□ 0.83
RER1-204ENST00000378518 SEMA3CQ99985 751 aa20.23■□□□□ 0.83
RER1-204ENST00000378518 ARRDC1-AS1Q9H2J1 176 aa20.23■□□□□ 0.83
RER1-204ENST00000378518 PYCARDQ9ULZ3 195 aa20.23■□□□□ 0.83
RER1-204ENST00000378518 ATP8A1Q9Y2Q0 1164 aa20.23■□□□□ 0.83
RER1-204ENST00000378518 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.23■□□□□ 0.83
RER1-204ENST00000378518 BCLAF3A2AJT9 711 aaKnown RBP20.22■□□□□ 0.83
RER1-204ENST00000378518 SOCS5O75159 536 aa20.22■□□□□ 0.83
RER1-204ENST00000378518 CA4P22748 312 aa20.22■□□□□ 0.83
RER1-204ENST00000378518 MPLP40238 635 aa20.22■□□□□ 0.83
RER1-204ENST00000378518 EIF3EP60228 445 aaKnown RBP20.22■□□□□ 0.83
RER1-204ENST00000378518 POLR2LP62875 67 aaKnown RBP20.22■□□□□ 0.83
RER1-204ENST00000378518 ZBTB17Q13105 803 aa20.22■□□□□ 0.83
RER1-204ENST00000378518 SLC45A4Q5BKX6 768 aa20.22■□□□□ 0.83
RER1-204ENST00000378518 ALG1LQ6GMV1 187 aa20.22■□□□□ 0.83
RER1-204ENST00000378518 NEK5Q6P3R8 708 aa20.22■□□□□ 0.83
RER1-204ENST00000378518 RABEPKQ7Z6M1 372 aa20.22■□□□□ 0.83
RER1-204ENST00000378518 TTC7BQ86TV6 843 aa20.22■□□□□ 0.83
RER1-204ENST00000378518 SYT12Q8IV01 421 aa20.22■□□□□ 0.83
RER1-204ENST00000378518 VAT1Q99536 393 aa20.22■□□□□ 0.83
RER1-204ENST00000378518 TLR10Q9BXR5 811 aa20.22■□□□□ 0.83
RER1-204ENST00000378518 NOD2Q9HC29 1040 aa20.22■□□□□ 0.83
RER1-204ENST00000378518 SUSD2Q9UGT4 822 aa20.22■□□□□ 0.83
RER1-204ENST00000378518 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.22■□□□□ 0.83
RER1-204ENST00000378518 TSPAN11A1L157 253 aa20.21■□□□□ 0.83
RER1-204ENST00000378518 TTC24A2A3L6 582 aaPredicted RBP20.21■□□□□ 0.83
RER1-204ENST00000378518 NEMP1O14524 444 aa20.21■□□□□ 0.83
RER1-204ENST00000378518 AP1G1O43747 822 aa20.21■□□□□ 0.83
RER1-204ENST00000378518 LRP3O75074 770 aa20.21■□□□□ 0.83
RER1-204ENST00000378518 GJB3O75712 270 aa20.21■□□□□ 0.83
RER1-204ENST00000378518 PCDH8O95206 1070 aa20.21■□□□□ 0.83
RER1-204ENST00000378518 SERPINF2P08697 491 aa20.21■□□□□ 0.83
RER1-204ENST00000378518 RBP3P10745 1247 aa20.21■□□□□ 0.83
RER1-204ENST00000378518 GNSP15586 552 aa20.21■□□□□ 0.83
RER1-204ENST00000378518 ITPKAP23677 461 aa20.21■□□□□ 0.83
RER1-204ENST00000378518 NFKBIAP25963 317 aa20.21■□□□□ 0.83
RER1-204ENST00000378518 HOXD12P35452 270 aa20.21■□□□□ 0.83
RER1-204ENST00000378518 CCR5P51681 352 aa20.21■□□□□ 0.83
RER1-204ENST00000378518 TAS2R38P59533 333 aa20.21■□□□□ 0.83
RER1-204ENST00000378518 ELP6Q0PNE2 266 aa20.21■□□□□ 0.83
RER1-204ENST00000378518 KLF1Q13351 362 aaPredicted RBP20.21■□□□□ 0.83
RER1-204ENST00000378518 TEX44Q53QW1 395 aa20.21■□□□□ 0.83
RER1-204ENST00000378518 B4GALNT4Q76KP1 1039 aa20.21■□□□□ 0.83
RER1-204ENST00000378518 ZSCAN30Q86W11 494 aa20.21■□□□□ 0.83
RER1-204ENST00000378518 SLC35F6Q8N357 371 aa20.21■□□□□ 0.83
RER1-204ENST00000378518 HTR3CQ8WXA8 447 aa20.21■□□□□ 0.83
RER1-204ENST00000378518 VOPP1Q96AW1 172 aa20.21■□□□□ 0.83
RER1-204ENST00000378518 BIRC7Q96CA5 298 aa20.21■□□□□ 0.83
RER1-204ENST00000378518 AGAP3Q96P47 875 aa20.21■□□□□ 0.83
RER1-204ENST00000378518 PLXNA2O75051 1894 aa20.21■□□□□ 0.83
RER1-204ENST00000378518 ATXN2Q99700 1313 aaKnown RBP20.21■□□□□ 0.83
RER1-204ENST00000378518 UPK3BL1B0FP48 263 aa20.2■□□□□ 0.82
RER1-204ENST00000378518 UPK3BL2E5RIL1 263 aa20.2■□□□□ 0.82
RER1-204ENST00000378518 TSPAN6O43657 245 aa20.2■□□□□ 0.82
RER1-204ENST00000378518 RNGTTO60942 597 aaKnown RBP20.2■□□□□ 0.82
RER1-204ENST00000378518 STK10O94804 968 aaKnown RBP20.2■□□□□ 0.82
RER1-204ENST00000378518 PTPN3P26045 913 aa20.2■□□□□ 0.82
RER1-204ENST00000378518 NUDT1P36639 197 aa20.2■□□□□ 0.82
RER1-204ENST00000378518 ABL2P42684 1182 aa20.2■□□□□ 0.82
RER1-204ENST00000378518 DSC2Q02487 901 aa20.2■□□□□ 0.82
RER1-204ENST00000378518 KIAA1161Q6NSJ0 714 aa20.2■□□□□ 0.82
RER1-204ENST00000378518 ERAP2Q6P179 960 aa20.2■□□□□ 0.82
RER1-204ENST00000378518 DARS2Q6PI48 645 aaKnown RBP20.2■□□□□ 0.82
RER1-204ENST00000378518 PRPF39Q86UA1 669 aaKnown RBP20.2■□□□□ 0.82
RER1-204ENST00000378518 TRIM69Q86WT6 500 aa20.2■□□□□ 0.82
RER1-204ENST00000378518 SLC13A5Q86YT5 568 aaPredicted RBP20.2■□□□□ 0.82
RER1-204ENST00000378518 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.2■□□□□ 0.82
RER1-204ENST00000378518 PDCD6IPQ8WUM4 868 aaKnown RBP20.2■□□□□ 0.82
RER1-204ENST00000378518 DNASE2BQ8WZ79 361 aa20.2■□□□□ 0.82
RER1-204ENST00000378518 ECHDC3Q96DC8 303 aa20.2■□□□□ 0.82
RER1-204ENST00000378518 FEM1CQ96JP0 617 aa20.2■□□□□ 0.82
RER1-204ENST00000378518 CEP41Q9BYV8 373 aa20.2■□□□□ 0.82
RER1-204ENST00000378518 MIR1-1HGQ9H1L0 117 aa20.2■□□□□ 0.82
RER1-204ENST00000378518 VPS45Q9NRW7 570 aa20.2■□□□□ 0.82
RER1-204ENST00000378518 KLHL8Q9P2G9 620 aaPredicted RBP20.2■□□□□ 0.82
RER1-204ENST00000378518 PILRBQ9UKJ0 227 aa20.2■□□□□ 0.82
RER1-204ENST00000378518 PCDHGC4Q9Y5F7 938 aa20.2■□□□□ 0.82
RER1-204ENST00000378518 FADS3Q9Y5Q0 445 aa20.2■□□□□ 0.82
RER1-204ENST00000378518 USP27XA6NNY8 438 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms