RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 CDV3Q9UKY7 258 aaKnown RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 NDUFB9Q9Y6M9 179 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 AIM2O14862 343 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 PLIN3O60664 434 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 PLEKP08567 350 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 MMP10P09238 476 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 KCNE1P15382 129 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 EIF2DP41214 584 aaKnown RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 DEFB107AQ8IZN7 70 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 NAT8LQ8N9F0 302 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 TTLQ8NG68 377 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 SETD6Q8TBK2 473 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 RASGRP4Q8TDF6 673 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 ROGDIQ9GZN7 287 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 SPO11Q9Y5K1 396 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 SERINC3Q13530 473 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 COLGALT1Q8NBJ5 622 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 DENND6BQ8NEG7 585 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 MAGIXQ9H6Y5 334 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 OR12D3Q9UGF7 316 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 G3BP2Q9UN86 482 aaKnown RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 SLC15A5A6NIM6 579 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 STX16-NPEPL1H3BU86 382 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 STX16O14662 325 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 UROSP10746 265 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 CCNFP41002 786 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 PTGIRP43119 386 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 IZUMO2Q6UXV1 221 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 SP110Q9HB58 689 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 NOS1APO75052 506 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 EPB42P16452 691 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 MAPKAPK2P49137 400 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 RING1Q06587 406 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 CATSPERGQ6ZRH7 1159 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 OTOAQ7RTW8 1153 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 BCL7CQ8WUZ0 217 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 DUS3LQ96G46 650 aaKnown RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 VPS51Q9UID3 782 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 FBXW11Q9UKB1 542 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 APOL2Q9BQE5 337 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 KIFC1Q9BW19 673 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 SLC29A3Q9BZD2 475 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 GPR88Q9GZN0 384 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 ZNF624Q9P2J8 865 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 KCNE2Q9Y6J6 123 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 DMC1Q14565 340 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 GJC2Q5T442 439 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 GATA6Q92908 595 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 THUMPD3Q9BV44 507 aaKnown RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 RIBC2Q9H4K1 309 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 KERAO60938 352 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 ERP29P30040 261 aaKnown RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 FAM182AQ5T1J6 154 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 UNC5AQ6ZN44 842 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 ZNF607Q96SK3 696 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 BCO2Q9BYV7 579 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 ETNK2Q9NVF9 386 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 TYROBPO43914 113 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 COX4I1P13073 169 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 GRIK3Q13003 919 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 MEDAGQ5VYS4 303 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 PRCCQ92733 491 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 SELENONQ9NZV5 590 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 SAE1Q9UBE0 346 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 HSD3B1P14060 373 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 HSD3B2P26439 372 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 PPP3CAQ08209 521 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 ACOX1Q15067 660 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 PHF21AQ96BD5 680 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 GIMAP4Q9NUV9 329 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 MAN2B2Q9Y2E5 1009 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 HAT1O14929 419 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 STAT5AP42229 794 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 QKIQ96PU8 341 aaKnown RBP eCLIP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 CILPO75339 1184 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 EIF2AK2P19525 551 aaKnown RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 BCAP31P51572 246 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 CLPBQ9H078 707 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 KCNH4Q9UQ05 1017 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 PEX11AO75192 247 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 YWHAHQ04917 246 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 LRRC14Q15048 493 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 SKIV2LQ15477 1246 aaKnown RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 SLC39A10Q9ULF5 831 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 SP140Q13342 867 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 FAM47EQ6ZV65 393 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 ADAT2Q7Z6V5 191 aaKnown RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 FAM159BA6NKW6 160 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 ZNF23P17027 643 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 CBWD2Q8IUF1 395 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 OR8J3Q8NGG0 315 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 HCAR2Q8TDS4 363 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 PPP1R16BQ96T49 567 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 GAD1Q99259 594 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 KCNN2Q9H2S1 579 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 LSM7Q9UK45 103 aaKnown RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 SLC9A4Q6AI14 798 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 ZBTB14O43829 449 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 TNS2Q63HR2 1409 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 SYN3O14994 580 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms