RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 CPSF6Q16630 551 aaKnown RBP eCLIP17.28■□□□□ 0.36
MCF2L-203ENST00000375604 AFTPHQ6ULP2 937 aa17.28■□□□□ 0.36
MCF2L-203ENST00000375604 BTN2A1Q7KYR7 527 aa17.28■□□□□ 0.36
MCF2L-203ENST00000375604 FAM71AQ8IYT1 594 aa17.28■□□□□ 0.36
MCF2L-203ENST00000375604 PPTC7Q8NI37 304 aa17.28■□□□□ 0.36
MCF2L-203ENST00000375604 PNPT1Q8TCS8 783 aaKnown RBP17.28■□□□□ 0.36
MCF2L-203ENST00000375604 SH3GL3Q99963 347 aa17.28■□□□□ 0.36
MCF2L-203ENST00000375604 MSX2P35548 267 aaPredicted RBP17.28■□□□□ 0.36
MCF2L-203ENST00000375604 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.28■□□□□ 0.36
MCF2L-203ENST00000375604 SLC51AQ86UW1 340 aa17.28■□□□□ 0.36
MCF2L-203ENST00000375604 UNC93AQ86WB7 457 aa17.28■□□□□ 0.36
MCF2L-203ENST00000375604 OLFM1Q99784 485 aa17.28■□□□□ 0.36
MCF2L-203ENST00000375604 CXorf56Q9H5V9 222 aa17.28■□□□□ 0.36
MCF2L-203ENST00000375604 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.28■□□□□ 0.36
MCF2L-203ENST00000375604 PAICSP22234 425 aaKnown RBP17.28■□□□□ 0.36
MCF2L-203ENST00000375604 CXCR3P49682 368 aa17.28■□□□□ 0.36
MCF2L-203ENST00000375604 TAF10Q12962 218 aa17.28■□□□□ 0.36
MCF2L-203ENST00000375604 APTXQ7Z2E3 356 aaKnown RBP17.28■□□□□ 0.36
MCF2L-203ENST00000375604 IZUMO1Q8IYV9 350 aa17.28■□□□□ 0.36
MCF2L-203ENST00000375604 A0A1W2PPM1 405 aa17.27■□□□□ 0.36
MCF2L-203ENST00000375604 ACSL4O60488 711 aa17.27■□□□□ 0.36
MCF2L-203ENST00000375604 CST3P01034 146 aaPredicted RBP17.27■□□□□ 0.36
MCF2L-203ENST00000375604 ERCC2P18074 760 aa17.27■□□□□ 0.36
MCF2L-203ENST00000375604 SKA1Q96BD8 255 aa17.27■□□□□ 0.36
MCF2L-203ENST00000375604 DUSP16Q9BY84 665 aa17.27■□□□□ 0.36
MCF2L-203ENST00000375604 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.27■□□□□ 0.36
MCF2L-203ENST00000375604 TK2O00142 265 aa17.27■□□□□ 0.36
MCF2L-203ENST00000375604 CYP1A1P04798 512 aaPredicted RBP17.27■□□□□ 0.36
MCF2L-203ENST00000375604 HOXA10P31260 410 aaPredicted RBP17.27■□□□□ 0.36
MCF2L-203ENST00000375604 C1DQ13901 141 aaKnown RBP17.27■□□□□ 0.36
MCF2L-203ENST00000375604 LPCAT2Q7L5N7 544 aa17.27■□□□□ 0.36
MCF2L-203ENST00000375604 RERGQ96A58 199 aaPredicted RBP17.27■□□□□ 0.36
MCF2L-203ENST00000375604 MPP4Q96JB8 637 aa17.27■□□□□ 0.36
MCF2L-203ENST00000375604 EQTNQ9NQ60 294 aa17.27■□□□□ 0.36
MCF2L-203ENST00000375604 TRMT13Q9NUP7 481 aaKnown RBP17.27■□□□□ 0.36
MCF2L-203ENST00000375604 CSH1P0DML2 217 aa17.27■□□□□ 0.36
MCF2L-203ENST00000375604 CSH2P0DML3 217 aa17.27■□□□□ 0.36
MCF2L-203ENST00000375604 GRIA3P42263 894 aa17.27■□□□□ 0.36
MCF2L-203ENST00000375604 TRIM71Q2Q1W2 868 aaKnown RBP17.27■□□□□ 0.36
MCF2L-203ENST00000375604 RSBN1Q5VWQ0 802 aaPredicted RBP17.27■□□□□ 0.36
MCF2L-203ENST00000375604 CEP68Q76N32 757 aa17.27■□□□□ 0.36
MCF2L-203ENST00000375604 FAM9CQ8IZT9 166 aa17.27■□□□□ 0.36
MCF2L-203ENST00000375604 DDHD1Q8NEL9 900 aa17.27■□□□□ 0.36
MCF2L-203ENST00000375604 TLE6Q9H808 572 aa17.27■□□□□ 0.36
MCF2L-203ENST00000375604 OR10H1Q9Y4A9 318 aa17.27■□□□□ 0.36
MCF2L-203ENST00000375604 TMEM88BA6NKF7 163 aa17.27■□□□□ 0.35
MCF2L-203ENST00000375604 C1QTNF3-AMACRE9PGA6 284 aa17.27■□□□□ 0.35
MCF2L-203ENST00000375604 CD3EAPO15446 510 aaKnown RBP17.27■□□□□ 0.35
MCF2L-203ENST00000375604 ASGR1P07306 291 aa17.27■□□□□ 0.35
MCF2L-203ENST00000375604 MRPS35P82673 323 aaKnown RBP17.27■□□□□ 0.35
MCF2L-203ENST00000375604 NEK10Q6ZWH5 1172 aa17.27■□□□□ 0.35
MCF2L-203ENST00000375604 CMC1Q7Z7K0 106 aa17.27■□□□□ 0.35
MCF2L-203ENST00000375604 ENPP3O14638 875 aa17.27■□□□□ 0.35
MCF2L-203ENST00000375604 PLSCR1O15162 318 aa17.27■□□□□ 0.35
MCF2L-203ENST00000375604 FAM58BPP0C7Q3 252 aa17.27■□□□□ 0.35
MCF2L-203ENST00000375604 ELFN1P0C7U0 828 aa17.27■□□□□ 0.35
MCF2L-203ENST00000375604 PTSQ03393 145 aa17.27■□□□□ 0.35
MCF2L-203ENST00000375604 LRRC55Q6ZSA7 311 aa17.27■□□□□ 0.35
MCF2L-203ENST00000375604 OR4A15Q8NGL6 344 aa17.27■□□□□ 0.35
MCF2L-203ENST00000375604 CYP2S1Q96SQ9 504 aa17.27■□□□□ 0.35
MCF2L-203ENST00000375604 OGDHLQ9ULD0 1010 aa17.27■□□□□ 0.35
MCF2L-203ENST00000375604 NR2E3Q9Y5X4 410 aa17.27■□□□□ 0.35
MCF2L-203ENST00000375604 AGLP35573 1532 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 KRT75O95678 551 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 CCNE2O96020 404 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 GLUD1P00367 558 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 LDLRP01130 860 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 CORO1AP31146 461 aaKnown RBP17.26■□□□□ 0.35
MCF2L-203ENST00000375604 NOMO3P69849 1222 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 STX4Q12846 297 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 PAGE2BQ5JRK9 111 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 TMPRSS6Q8IU80 811 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 RHOBTB2Q9BYZ6 727 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 DCLRE1BQ9H816 532 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 ASF1AQ9Y294 204 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 TSPAN19P0C672 248 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 CYP4B1P13584 511 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 SH3RF1Q7Z6J0 888 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 MAGEC3Q8TD91 643 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 KCTD15Q96SI1 283 aaPredicted RBP17.26■□□□□ 0.35
MCF2L-203ENST00000375604 hCG_1818297A0A087WSY0 165 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 LSM3P62310 102 aaKnown RBP17.26■□□□□ 0.35
MCF2L-203ENST00000375604 BIKQ13323 160 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 ZNF605Q86T29 641 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 STAG3L4Q8TBR4 150 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 PCDHB18PQ96TA0 734 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 KLHL25Q9H0H3 589 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 PTPRJQ12913 1337 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 CLOCKO15516 846 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 KRT33AO76009 404 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 PYROXD2Q8N2H3 581 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 BDH2Q9BUT1 245 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 ARHGEF3Q9NR81 526 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 EVLQ9UI08 416 aaPredicted RBP17.26■□□□□ 0.35
MCF2L-203ENST00000375604 SNX6Q9UNH7 406 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 POLR3HQ9Y535 204 aaPredicted RBP17.26■□□□□ 0.35
MCF2L-203ENST00000375604 ADGRA3Q8IWK6 1321 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 KANSL1LA0AUZ9 987 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 MYL12BO14950 172 aa17.26■□□□□ 0.35
MCF2L-203ENST00000375604 BMP10O95393 424 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms