RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 OR14I1A6ND48 311 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 TBC1D3FA6NER0 549 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-202ENST00000375405 URADA6NGE7 173 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 TBC1D3LB9A6J9 549 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 PPEF2O14830 753 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 TLX3O43711 291 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-202ENST00000375405 HCN1O60741 890 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 LILRB5O75023 590 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 TBC1D3HP0C7X1 549 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 G0S2P27469 103 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 GRK6P43250 576 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 ENPEPQ07075 957 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 TBC1D3GQ6DHY5 549 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 TBC1D3CQ6IPX1 549 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 NOXRED1Q6NXP6 359 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 SERPINA13PQ6UXR4 307 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 RTL4Q6ZR62 310 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 GPR141Q7Z602 305 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 TBC1D3Q8IZP1 549 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-202ENST00000375405 RIBC1Q8N443 379 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-202ENST00000375405 GMCL1P1Q8NEA9 526 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 OR2AJ1Q8NGZ0 328 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 RASGRP4Q8TDF6 673 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 TNFAIP8L1Q8WVP5 186 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 ZNF717Q9BY31 904 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-202ENST00000375405 ZCCHC2Q9C0B9 1178 aaKnown RBP4.67□□□□□ -1.66
SCN1A-202ENST00000375405 B3GNT4Q9C0J1 378 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 CRISPLD1Q9H336 500 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 FAM83DQ9H4H8 585 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 GPAMQ9HCL2 828 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 POLE4Q9NR33 117 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 TBCCD1Q9NVR7 557 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 PIM2Q9P1W9 311 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 FBXO9Q9UK97 447 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-202ENST00000375405 RAD54BQ9Y620 910 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 DUSP10Q9Y6W6 482 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 SYNJ2O15056 1496 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 ZBTB7BO15156 539 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-202ENST00000375405 FSBPO95073 299 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 MAP3K6O95382 1288 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 MED26O95402 600 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 JUNDP17535 347 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 SLC2A5P22732 501 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 ITGA8P53708 1063 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 SLC26A5P58743 744 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 PRKCDQ05655 676 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 AP5B1Q2VPB7 878 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 ATP6AP1LQ52LC2 224 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 LRRC66Q68CR7 880 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 TMEM110Q86TL2 294 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 SCUBE3Q8IX30 993 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 ZNF548Q8NEK5 533 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-202ENST00000375405 FAM167AQ96KS9 214 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 ADGRE3Q9BY15 652 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 CDH19Q9H159 772 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 EIF2B3Q9NR50 452 aaKnown RBP4.67□□□□□ -1.66
SCN1A-202ENST00000375405 CLIC5Q9NZA1 410 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 ALG5Q9Y673 324 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 EPN1Q9Y6I3 576 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-202ENST00000375405 POLEQ07864 2286 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 NPHP3-ACAD11A0A0J9YXS1 232 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 CPSF4LA6NMK7 179 aaKnown RBP4.67□□□□□ -1.66
SCN1A-202ENST00000375405 A8MUI8 341 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 H0YGN5 161 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 DNAJA2O60884 412 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 ZNF20P17024 532 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 GTF2H1P32780 548 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 IRAK1P51617 712 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 TAS2R50P59544 299 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 MAD2L1Q13257 205 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-202ENST00000375405 PEX6Q13608 980 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 FAM187BQ17R55 369 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 FAM83BQ5T0W9 1011 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 LRRC38Q5VT99 294 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 SWSAP1Q6NVH7 229 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 DCP1BQ8IZD4 617 aaKnown RBP4.67□□□□□ -1.66
SCN1A-202ENST00000375405 OR8H3Q8N146 312 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 SRBD1Q8N5C6 995 aaKnown RBP4.67□□□□□ -1.66
SCN1A-202ENST00000375405 OR2T27Q8NH04 317 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 MAGEC3Q8TD91 643 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 ZFP90Q8TF47 636 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 GCDHQ92947 438 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-202ENST00000375405 SMIM12Q96EX1 92 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 LRMDAQ9H2I8 198 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 CNOT10Q9H9A5 744 aaKnown RBP4.67□□□□□ -1.66
SCN1A-202ENST00000375405 SLC35D1Q9NTN3 355 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 BTBD7Q9P203 1132 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 CDH9Q9ULB4 789 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 DGKBQ9Y6T7 804 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 KIF21AQ7Z4S6 1674 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 ABCB11O95342 1321 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 A0A0A6YYH2 397 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 A6NJ64 397 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 A6NLC8 198 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 PER2O15055 1255 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 SMAD9O15198 467 aaKnown RBP4.67□□□□□ -1.66
SCN1A-202ENST00000375405 TBX1O43435 398 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 TYMPP19971 482 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 HSD11B1P28845 292 aa4.67□□□□□ -1.66
SCN1A-202ENST00000375405 IL12AP29459 219 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms