RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 PITPNAQ00169 270 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 SMARCB1Q12824 385 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 MOGQ16653 247 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 STRADAQ7RTN6 431 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 MRPL39Q9NYK5 338 aaKnown RBP10.27□□□□□ -0.77
PTCH1-204ENST00000375290 RPS6KB2Q9UBS0 482 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 TRIM17Q9Y577 477 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 AKAP8O43823 692 aaKnown RBP10.27□□□□□ -0.77
PTCH1-204ENST00000375290 PMPCBO75439 489 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 ASLP04424 464 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 EPB42P16452 691 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 MIPP30301 263 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 ATN1P54259 1190 aaPredicted RBP10.27□□□□□ -0.77
PTCH1-204ENST00000375290 RPL19P84098 196 aaKnown RBP10.27□□□□□ -0.77
PTCH1-204ENST00000375290 ZNF284Q2VY69 593 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 NEPROQ6NW34 567 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 TSPEARQ8WU66 669 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 BTN2A2Q8WVV5 523 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 LRRC4CQ9HCJ2 640 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 CHST7Q9NS84 486 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 KANSL3Q9P2N6 904 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 TRPS1Q9UHF7 1281 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 NPHS1O60500 1241 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 SEC22BO75396 215 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 ALDH1A2O94788 518 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 GRM3Q14832 879 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 GPATCH1Q9BRR8 931 aaKnown RBP10.27□□□□□ -0.77
PTCH1-204ENST00000375290 TRIM39Q9HCM9 518 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 UPB1Q9UBR1 384 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 SUCOQ9UBS9 1254 aaKnown RBP10.27□□□□□ -0.77
PTCH1-204ENST00000375290 ZNRF3Q9ULT6 936 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 PTGES3LE9PB15 166 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 DNM1LO00429 736 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 TNFRSF21O75509 655 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 PABPC4LP0CB38 370 aaKnown RBP10.26□□□□□ -0.77
PTCH1-204ENST00000375290 FBXW4P57775 412 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 USP46P62068 366 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 GET4Q7L5D6 327 aaPredicted RBP10.26□□□□□ -0.77
PTCH1-204ENST00000375290 CSGALNACT1Q8TDX6 532 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 CPVLQ9H3G5 476 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 NXF3Q9H4D5 531 aaKnown RBP10.26□□□□□ -0.77
PTCH1-204ENST00000375290 PIM2Q9P1W9 311 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 A0A1W2PQ67 120 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 HKDC1Q2TB90 917 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 AFTPHQ6ULP2 937 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 MPP5Q8N3R9 675 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 NIPA2Q8N8Q9 360 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 KCTD15Q96SI1 283 aaPredicted RBP10.26□□□□□ -0.77
PTCH1-204ENST00000375290 DGCR6LQ9BY27 220 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 AFF4Q9UHB7 1163 aaKnown RBP10.26□□□□□ -0.77
PTCH1-204ENST00000375290 SSNA1O43805 119 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 FGFR1P11362 822 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 HNF4AP41235 474 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 LSM12Q3MHD2 195 aaKnown RBP10.26□□□□□ -0.77
PTCH1-204ENST00000375290 GJB7Q6PEY0 223 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 RAMP2O60895 175 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 FGF1P05230 155 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 OFCC1Q8IZS5 231 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 DNAJC19Q96DA6 116 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 NEDD4LQ96PU5 975 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 PSME2Q9UL46 239 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 ITIH1P19827 911 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 JAM2P57087 298 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 CNPY1Q3B7I2 92 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 WNT8BQ93098 351 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 HGH1Q9BTY7 390 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 AGPSO00116 658 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 NOS1APO75052 506 aaPredicted RBP10.26□□□□□ -0.77
PTCH1-204ENST00000375290 NADKO95544 446 aaPredicted RBP10.26□□□□□ -0.77
PTCH1-204ENST00000375290 IL1BP01584 269 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 RGS7P49802 495 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 NELL1Q92832 810 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 TMEM159Q96B96 161 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 STOX2Q9P2F5 926 aaPredicted RBP10.26□□□□□ -0.77
PTCH1-204ENST00000375290 CRYL1Q9Y2S2 319 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 ALDH9A1P49189 494 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 TMBIM6P55061 237 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 LMBRD2Q68DH5 695 aaPredicted RBP10.26□□□□□ -0.77
PTCH1-204ENST00000375290 SYTL1Q8IYJ3 562 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 FAM208AQ9UK61 1670 aaKnown RBP10.26□□□□□ -0.77
PTCH1-204ENST00000375290 SLC25A3Q00325 362 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 FAM220AQ7Z4H9 259 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 ABCC13Q9NSE7 274 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 FNIP2Q9P278 1114 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 PCDHGC3Q9UN70 934 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 A0A087WZ62 844 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 MAGEB3O15480 346 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 GLRBP48167 497 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 PRKCQQ04759 706 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 MFSD14AQ96MC6 490 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 CDHR5Q9HBB8 845 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 AASSQ9UDR5 926 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 TMEM59LQ9UK28 342 aa10.26□□□□□ -0.77
PTCH1-204ENST00000375290 SLC2A4P14672 509 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 GPC1P35052 558 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 BAATQ14032 418 aaPredicted RBP10.25□□□□□ -0.77
PTCH1-204ENST00000375290 PCSK7Q16549 785 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 DDI2Q5TDH0 399 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 LCN1P1Q5VSP4 162 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 DSELQ8IZU8 1212 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms